RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 ST13P5Q8NFI4 369 aaPredicted RBP9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 LNX1Q8TBB1 728 aaPredicted RBP9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 RUBCNQ92622 972 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 TTPALQ9BTX7 342 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 PDRG1Q9NUG6 133 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 CACNG4Q9UBN1 327 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 FBXW11Q9UKB1 542 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 CHD6Q8TD26 2715 aa9.39□□□□□ -0.91
R3HDM2-212ENST00000548161 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 POTEMA6NI47 508 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 PFKFB2O60825 505 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 LRRN2O75325 713 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 CTDNEP1O95476 244 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 NTHL1P78549 312 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 CCDC173Q0VFZ6 552 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 NR5A1Q13285 461 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 SNW1Q13573 536 aaKnown RBP9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 CALCRLQ16602 461 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 FAM187BQ17R55 369 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 ZNF528Q3MIS6 628 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 SLC44A4Q53GD3 710 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 LIN9Q5TKA1 542 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 DGLUCYQ7Z3D6 616 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 DCLK2Q8N568 766 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 SUMF1Q8NBK3 374 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 PIGOQ8TEQ8 1089 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 ANP32BQ92688 251 aaKnown RBP9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 FGF13Q92913 245 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 TNFRSF25Q93038 417 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 BORCS6Q96GS4 357 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 GBP4Q96PP9 640 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 OSBPL6Q9BZF3 934 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 POLR3FQ9H1D9 316 aaPredicted RBP9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 FZD8Q9H461 694 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 TTC12Q9H892 705 aaPredicted RBP9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 PRMT7Q9NVM4 692 aaPredicted RBP9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 ORC3Q9UBD5 711 aaPredicted RBP9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 MYH15Q9Y2K3 1946 aa9.38□□□□□ -0.91
R3HDM2-212ENST00000548161 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 A0A087WWV3 80 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 MED19A0JLT2 244 aaPredicted RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 CASTOR2A6NHX0 329 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 TTLL13PA6NNM8 815 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 PTGESO14684 152 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 ADAM12O43184 909 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 DTNBO60941 627 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 XYLBO75191 536 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 KIF4AO95239 1232 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 THP07101 528 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 C8AP07357 584 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 POU2F2P09086 479 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 KRT2P35908 639 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 PRKCQQ04759 706 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 ELAVL2Q12926 359 aaKnown RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 RAB33AQ14088 237 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 PUM1Q14671 1186 aaKnown RBP eCLIP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 NAB2Q15742 525 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 MLF2Q15773 248 aaPredicted RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 PSMD5Q16401 504 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 HS1BP3Q53T59 392 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 CDCA2Q69YH5 1023 aaPredicted RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 RTL10Q7L3V2 364 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 CEP57Q86XR8 500 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 ITFG1Q8TB96 612 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 HASPINQ8TF76 798 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 WASF1Q92558 559 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 CCDC43Q96MW1 224 aaKnown RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 MTMR9Q96QG7 549 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 HINFPQ9BQA5 517 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 BCO2Q9BYV7 579 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 CXCL16Q9H2A7 254 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 GPRC5CQ9NQ84 441 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 SNTG2Q9NY99 539 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 DLL3Q9NYJ7 618 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 FBXO4Q9UKT5 387 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 KCNH3Q9ULD8 1083 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 TPCN1Q9ULQ1 816 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 MTF2Q9Y483 593 aaPredicted RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 CNOT1A5YKK6 2376 aaKnown RBP9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
R3HDM2-212ENST00000548161 FAM170BA6NMN3 283 aa9.36□□□□□ -0.91
R3HDM2-212ENST00000548161 WNT7AO00755 349 aa9.36□□□□□ -0.91
R3HDM2-212ENST00000548161 N4BP3O15049 544 aa9.36□□□□□ -0.91
R3HDM2-212ENST00000548161 CCL16O15467 120 aa9.36□□□□□ -0.91
R3HDM2-212ENST00000548161 NEMFO60524 1076 aa9.36□□□□□ -0.91
R3HDM2-212ENST00000548161 USO1O60763 962 aaKnown RBP9.36□□□□□ -0.91
R3HDM2-212ENST00000548161 KINO60870 393 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms