RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 RSRC1Q96IZ7 334 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 XPO6Q96QU8 1125 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 MXRA8Q9BRK3 442 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 FAM49AQ9H0Q0 323 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 AIPL1Q9NZN9 384 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 GAKO14976 1311 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TLR3O15455 904 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 ATP11AP98196 1134 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 CXCL9Q07325 125 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 HHATQ5VTY9 493 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TMC3Q7Z5M5 1100 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 MCF2L2Q86YR7 1114 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 SLC5A5Q92911 643 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 ARHGEF2Q92974 986 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 MAK16Q9BXY0 300 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TMEM206Q9H813 350 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TPX2Q9ULW0 747 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 MAD1L1Q9Y6D9 718 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 ECM29Q5VYK3 1845 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 CCDC78A2IDD5 438 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 WDR64B1ANS9 1081 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 PGK2P07205 417 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 GJB1P08034 283 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 MYO1EQ12965 1108 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 SPRED3Q2MJR0 410 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 ANGEL2Q5VTE6 544 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 KRT39Q6A163 491 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 NETO2Q8NC67 525 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 FBXL13Q8NEE6 735 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 ETNPPLQ8TBG4 499 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 NSRP1Q9H0G5 558 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 DEFB129Q9H1M3 183 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 GANQ9H2C0 597 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 HEY1Q9Y5J3 304 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 CHD4Q14839 1912 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 CDC25CP30307 473 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 SLC8A1P32418 973 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 ARMC9Q7Z3E5 817 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 ACTRT1Q8TDG2 376 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 SLITRK6Q9H5Y7 841 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 FGFR1OP2Q9NVK5 253 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 G3BP2Q9UN86 482 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 TELO2Q9Y4R8 837 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 YDJCA8MPS7 323 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 TCP11X1B4DZS4 312 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 CYP3A4P08684 503 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 ZSCAN5DPP0CG00 497 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 NPTX2P47972 431 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 YWHAGP61981 247 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 CNTN2Q02246 1040 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 FAXCQ5TGI0 409 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 SCFD2Q8WU76 684 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 ATP6V0A1Q93050 837 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 CNOT10Q9H9A5 744 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 NGRNQ9NPE2 291 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 RAB20Q9NX57 234 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 RBAKQ9NYW8 714 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 SEPT10Q9P0V9 454 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 EXOC1LA0A1B0GW35 172 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 TPD52L2O43399 206 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 KIF1CO43896 1103 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 RALAP11233 206 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 BRAFP15056 766 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 DRP2Q13474 957 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 NOP9Q86U38 636 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 RSAD2Q8WXG1 361 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 WNK4Q96J92 1243 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 COL20A1Q9P218 1284 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 CNOT7Q9UIV1 285 aaKnown RBP10.43□□□□□ -0.74
TRAF1-203ENST00000546084 RIPK3Q9Y572 518 aa10.43□□□□□ -0.74
TRAF1-203ENST00000546084 WNT10BO00744 389 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 CA4P22748 312 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 GNA15P30679 374 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 GCLCP48506 637 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 RGS7P49802 495 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 NOP14P78316 857 aaKnown RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 GPS1Q13098 491 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 GNPTABQ3T906 1256 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 AGBL2Q5U5Z8 902 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 SV2AQ7L0J3 742 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 SIAH1Q8IUQ4 282 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 PALM2Q8IXS6 379 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 LRRC34Q8IZ02 419 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 EMC1Q8N766 993 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 RNF149Q8NC42 400 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 FAM163AQ96GL9 167 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 GINM1Q9NU53 330 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 AKT3Q9Y243 479 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms