RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 PTENP60484 403 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.06
VPS33A-209ENST00000544349 MTHFD1LQ6UB35 978 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 TLK2Q86UE8 772 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 ZNF668Q96K58 619 aaPredicted RBP15.46■□□□□ 0.06
VPS33A-209ENST00000544349 ACO2Q99798 780 aaKnown RBP15.46■□□□□ 0.06
VPS33A-209ENST00000544349 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.06
VPS33A-209ENST00000544349 COQ4Q9Y3A0 265 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 BZW2Q9Y6E2 419 aaKnown RBP15.46■□□□□ 0.06
VPS33A-209ENST00000544349 KAT6AQ92794 2004 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 TULP1O00294 542 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-209ENST00000544349 PHACTR2O75167 634 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 LRRN2O75325 713 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 TOM1L1O75674 476 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 TOMM70O94826 608 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 ALDH1A1P00352 501 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 DLATP10515 647 aaKnown RBP15.45■□□□□ 0.06
VPS33A-209ENST00000544349 POU5F1BQ06416 359 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 PPFIA1Q13136 1202 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 DRAP1Q14919 205 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-209ENST00000544349 PSMD6Q15008 389 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 GRIK4Q16099 956 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 DNAAF5Q86Y56 855 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 SPATA4Q8NEY3 305 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 MS4A14Q96JA4 679 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 NOX5Q96PH1 765 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 LRRC1Q9BTT6 524 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 GPR88Q9GZN0 384 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 FZD8Q9H461 694 aa15.45■□□□□ 0.06
VPS33A-209ENST00000544349 TOPORSQ9NS56 1045 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-209ENST00000544349 F8VZ95 297 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ACKR2O00590 384 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 CLDN3O15551 220 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 FTCDO95954 541 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 FERP16591 822 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 TMOD1P28289 359 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 SOX5P35711 763 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 DNA2P51530 1060 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 CLDN10P78369 228 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 PTK2Q05397 1052 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 SLC18A3Q16572 532 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 LENG1Q96BZ8 264 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-209ENST00000544349 SELENOOQ9BVL4 669 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 INO80B-WBP1J3KQ70 363 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 PALMO75781 387 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 PRLRP16471 622 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 TCP1P17987 556 aaKnown RBP15.44■□□□□ 0.06
VPS33A-209ENST00000544349 SLC7A5Q01650 507 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 MBTD1Q05BQ5 628 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ZBTB41Q5SVQ8 909 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 MARCH8Q5T0T0 291 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 SV2AQ7L0J3 742 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ARHGEF19Q8IW93 802 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ZNF516Q92618 1163 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 SEMA4DQ92854 862 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.44■□□□□ 0.06
VPS33A-209ENST00000544349 INO80BQ9C086 356 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-209ENST00000544349 IFT122Q9HBG6 1241 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 UBE2TQ9NPD8 197 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ADAMTS1Q9UHI8 967 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 PACSIN2Q9UNF0 486 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-209ENST00000544349 Q9Y3F1 56 aa15.44■□□□□ 0.06
VPS33A-209ENST00000544349 ABLIM1O14639 778 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 GFPT2O94808 682 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 F2P00734 622 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 PSMC4P43686 418 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 GPC3P51654 580 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 NAP1L1P55209 391 aaKnown RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 FCGRTP55899 365 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 WNT7BP56706 349 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 NOGQ13253 232 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 NAB2Q15742 525 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 CCNI2Q6ZMN8 369 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 C15orf39Q6ZRI6 1047 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 ZNF571Q7Z3V5 609 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 FBXL13Q8NEE6 735 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 TAS1R2Q8TE23 839 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 AENQ8WTP8 325 aaKnown RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 EXOC4Q96A65 974 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 TCHPQ9BT92 498 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 ARHGAP39Q9C0H5 1083 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 MINDY3Q9H8M7 445 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 RBM12Q9NTZ6 932 aaKnown RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 AKT3Q9Y243 479 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 A0A087WZ62 844 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 RRN3P2A6NIE6 340 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 EVI5O60447 810 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 SYF2O95926 243 aaKnown RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 HARSP12081 509 aaKnown RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 PROZP22891 400 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 PHKA2P46019 1235 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 LMAN1P49257 510 aa15.43■□□□□ 0.06
VPS33A-209ENST00000544349 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-209ENST00000544349 ITIH3Q06033 890 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms