RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ERLIN2O94905 339 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 EIF3BP55884 814 aaKnown RBP19.01■□□□□ 0.63
SCARB1-208ENST00000544327 EMC2Q15006 297 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 SLC13A5Q86YT5 568 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-208ENST00000544327 DNERQ8NFT8 737 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 UBLCP1Q8WVY7 318 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-208ENST00000544327 ZNF516Q92618 1163 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 BICD1Q96G01 975 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 C1orf112Q9NSG2 853 aa19.01■□□□□ 0.63
SCARB1-208ENST00000544327 MYH9P35579 1960 aaKnown RBP19.01■□□□□ 0.63
SCARB1-208ENST00000544327 SSC5DA1L4H1 1573 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 ATMINO43313 823 aaPredicted RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 DLATP10515 647 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 UNGP13051 313 aaPredicted RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 LIG4P49917 911 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 ZACNQ401N2 412 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 ANGEL2Q5VTE6 544 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 AADACL2Q6P093 401 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 ZDHHC24Q6UX98 284 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 CHST13Q8NET6 341 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 FAM129AQ9BZQ8 928 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 FAM107BQ9H098 131 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19■□□□□ 0.639e-7■■■■■ 109.5
SCARB1-208ENST00000544327 AFG3L2Q9Y4W6 797 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 C4BPAP04003 597 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 MYBL1P10243 752 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 PYGMP11217 842 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 LSP1P33241 339 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 MDH1P40925 334 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 NAMPTP43490 491 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 FNTAP49354 379 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 ATP1A2P50993 1020 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 RWDD2BP57060 319 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 CORO7P57737 925 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 BPIFB4P59827 614 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 SIX1Q15475 284 aaPredicted RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 ADAT2Q7Z6V5 191 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 ZDHHC14Q8IZN3 488 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 GLG1Q92896 1179 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 MAGOHBQ96A72 148 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 TRIM11Q96F44 468 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 NIFKQ9BYG3 293 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 PORCNQ9H237 461 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 DHX33Q9H6R0 707 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 GRHL1Q9NZI5 618 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 CNOT8Q9UFF9 292 aaKnown RBP19■□□□□ 0.63
SCARB1-208ENST00000544327 PARP2Q9UGN5 583 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
SCARB1-208ENST00000544327 A0A0G2JMZ2 1700 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 IGKV6D-21A0A0A0MT36 114 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 SPOPO43791 374 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 OATP04181 439 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 NUDT17P0C025 328 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 ATP4AP20648 1035 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 COPB2P35606 906 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 ARL2P36404 184 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 STXBP2Q15833 593 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 MTERF2Q49AM1 385 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 SLFN12LQ6IEE8 588 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 OR2W6PQ8NHA6 318 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 C18orf8Q96DM3 657 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 CEP89Q96ST8 783 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 EPN3Q9H201 632 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 ZNF302Q9NR11 478 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 PCDHB2Q9Y5E7 798 aa18.99■□□□□ 0.63
SCARB1-208ENST00000544327 ZBTB7AO95365 584 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 CCT5P48643 541 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 POLGP54098 1239 aaPredicted RBP18.98■□□□□ 0.63
SCARB1-208ENST00000544327 SP2Q02086 613 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 STRN3Q13033 797 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 TTC27Q6P3X3 843 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 SLCO2A1Q92959 643 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 PAGR1Q9BTK6 254 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 ATXN2Q99700 1313 aaKnown RBP18.98■□□□□ 0.63
SCARB1-208ENST00000544327 ZNF541Q9H0D2 1346 aa18.98■□□□□ 0.63
SCARB1-208ENST00000544327 FAM170AA1A519 330 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 EBAG9O00559 213 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 KRT5P13647 590 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 COILP38432 576 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 PTGISQ16647 500 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 WDR44Q5JSH3 913 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 MCOLN2Q8IZK6 566 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 BTBD6Q96KE9 485 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 PLVAPQ9BX97 442 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 TRIM31Q9BZY9 425 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 MTFR1LQ9H019 292 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 EPB41L4BQ9H329 900 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 LRRC19Q9H756 370 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 CHORDC1Q9UHD1 332 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 FEZ2Q9UHY8 353 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 AGO2Q9UKV8 859 aaKnown RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 HLA-DRAP01903 254 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 CYP1A1P04798 512 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 GLRA2P23416 452 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 SLC1A1P43005 524 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 GUCY1A3Q02108 690 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 TDRD10Q5VZ19 366 aaKnown RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 TTC19Q6DKK2 380 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms