RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 C1orf228Q6PIY5 440 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 FBXO15Q8NCQ5 510 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 SIGLEC10Q96LC7 697 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 SGCZQ96LD1 299 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 NUP62CLQ9H1M0 184 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 MANSC1Q9H8J5 431 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 PNPOQ9NVS9 261 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 FAM53CQ9NYF3 392 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 GPRC5DQ9NZD1 345 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 CPA4Q9UI42 421 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 PCDHA6Q9UN73 950 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 CTDP1Q9Y5B0 961 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 PCDHA1Q9Y5I3 950 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 ARHGEF11O15085 1522 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 CUX1P39880 1505 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 A0A1B0GTL3 188 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 CREB3O43889 395 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 MGEA5O60502 916 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 TYRP14679 529 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 GUCY1A2P33402 732 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 PTPN7P35236 360 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 ATP2C1P98194 919 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 IFIT5Q13325 482 aaKnown RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 FGL2Q14314 439 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 POLD3Q15054 466 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 GRAMD1BQ3KR37 738 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 ERAP2Q6P179 960 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 Q6ZUG5 572 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 TRMT2AQ8IZ69 625 aaKnown RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 KRT78Q8N1N4 520 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 IL31RAQ8NI17 732 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 MDM1Q8TC05 714 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 GCDHQ92947 438 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 APIPQ96GX9 242 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 SLC38A3Q99624 504 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 SENP6Q9GZR1 1112 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 RUVBL1Q9Y265 456 aaKnown RBP4.6□□□□□ -1.67
SCFD1-207ENST00000544052 ACTL7AQ9Y615 435 aa4.6□□□□□ -1.67
SCFD1-207ENST00000544052 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 RHPN2P1A8MT19 583 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 GPR32O75388 356 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 SETSIPP0DME0 302 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 PI3P19957 117 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 CHAF1AQ13111 956 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-207ENST00000544052 STK3Q13188 491 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 FLYWCH1Q4VC44 716 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 VWA3BQ502W6 1294 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 PRAMEF14Q5SWL7 426 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 CNKSR3Q6P9H4 555 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 SAPCD2Q86UD0 394 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 PPP1R3BQ86XI6 285 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 DCBLD1Q8N8Z6 715 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 ANKRD53Q8N9V6 530 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 OR14K1Q8NGZ2 314 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 ANKS1AQ92625 1134 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 PHKBQ93100 1093 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 RIPOR3Q96MK2 946 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 YTHDC1Q96MU7 727 aaKnown RBP4.59□□□□□ -1.67
SCFD1-207ENST00000544052 LANCL2Q9NS86 450 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 ZDHHC9Q9Y397 364 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 SNX13Q9Y5W8 968 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 AQRO60306 1485 aaKnown RBP eCLIP4.59□□□□□ -1.672e-9■■■■■ 39.4
SCFD1-207ENST00000544052 PBRM1Q86U86 1689 aa4.59□□□□□ -1.67
SCFD1-207ENST00000544052 ZMYM3Q14202 1370 aa4.59□□□□□ -1.68
SCFD1-207ENST00000544052 ABHD14A-ACY1A0A1B0GW23 586 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 A0A1W2PPL8 197 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 NT5C1B-RDH14C9J2C7 533 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 FOSP01100 380 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 AHSGP02765 367 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CYP1A1P04798 512 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CASRP41180 1078 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 MTM1Q13496 603 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 ZNF827Q17R98 1081 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 AGBL4Q5VU57 503 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 GADL1Q6ZQY3 521 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 SYDE1Q6ZW31 735 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 ENAHQ8N8S7 591 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 PGBD4Q96DM1 585 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 MTFMTQ96DP5 389 aaKnown RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CYFIP2Q96F07 1278 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 RPL10LQ96L21 214 aaKnown RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 PTPN18Q99952 460 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CARD11Q9BXL7 1154 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CPNE7Q9UBL6 633 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 FGD5Q6ZNL6 1462 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 RASA4BC9J798 803 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 RASA4O43374 803 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 NCK2O43639 380 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 NPR1P16066 1061 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CSF2RBP32927 897 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CRHR1P34998 444 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 ALDH1A3P47895 512 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 CASP5P51878 434 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 WNT3AP56704 352 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 SESN2P58004 480 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-207ENST00000544052 BPIFB4P59827 614 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 DUSP2Q05923 314 aa4.58□□□□□ -1.68
SCFD1-207ENST00000544052 RAB39AQ14964 217 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms