RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 CKAP2Q8WWK9 683 aa9.12□□□□□ -0.95
ABCB1-210ENST00000543898 ZNF570Q96NI8 536 aa9.12□□□□□ -0.95
ABCB1-210ENST00000543898 RPS6KC1Q96S38 1066 aa9.12□□□□□ -0.95
ABCB1-210ENST00000543898 C11orf70Q9BRQ4 267 aa9.12□□□□□ -0.95
ABCB1-210ENST00000543898 ZNF577Q9BSK1 485 aa9.12□□□□□ -0.95
ABCB1-210ENST00000543898 PPARGC1AQ9UBK2 798 aaKnown RBP9.12□□□□□ -0.95
ABCB1-210ENST00000543898 AJAP1Q9UKB5 411 aaPredicted RBP9.12□□□□□ -0.95
ABCB1-210ENST00000543898 TRAF3IP3Q9Y228 551 aa9.12□□□□□ -0.95
ABCB1-210ENST00000543898 LMTK3Q96Q04 1460 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 EME2A4GXA9 379 aaPredicted RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 UNC5CO95185 931 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 EYA4O95677 639 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 PHBP35232 272 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 PIK3CAP42336 1068 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 YWHAGP61981 247 aaKnown RBP eCLIP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 RRP1BQ14684 758 aaKnown RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 PDCD2Q16342 344 aaPredicted RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 LVRNQ6Q4G3 990 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 TTC8Q8TAM2 541 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 RSAD2Q8WXG1 361 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CPA5Q8WXQ8 436 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 POMGNT1Q8WZA1 660 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 SLC5A5Q92911 643 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 TCHPQ9BT92 498 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 BCAS3Q9H6U6 928 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 RIOX1Q9H6W3 641 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 RNPEPL1Q9HAU8 725 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 C1orf112Q9NSG2 853 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 GINM1Q9NU53 330 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 ANKRD63C9JTQ0 380 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 HSPA1LP34931 641 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 IRX4P78413 519 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 BNIP1Q12981 228 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 EMC10Q5UCC4 262 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CLEC4GQ6UXB4 293 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CYP2W1Q8TAV3 490 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 KIAA1683Q9H0B3 1180 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 TMEM117Q9H0C3 514 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 ARHGEF10LQ9HCE6 1279 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CORO1CQ9ULV4 474 aaPredicted RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 DISP2A7MBM2 1401 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 NWD2Q9ULI1 1742 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 DPPA5A6NC42 116 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 PEX14O75381 377 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 SERPINB6P35237 376 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 POLGP54098 1239 aaPredicted RBP9.11□□□□□ -0.95
ABCB1-210ENST00000543898 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 WDR78Q5VTH9 848 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 RINT1Q6NUQ1 792 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 MIS18BP1Q6P0N0 1132 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 NLRP9Q7RTR0 991 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 PRUNE1Q86TP1 453 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CPXCR1Q8N123 301 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 DNAJC18Q9H819 358 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 CHST7Q9NS84 486 aa9.11□□□□□ -0.95
ABCB1-210ENST00000543898 PFDN1O60925 122 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 PIAS1O75925 651 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 KRT1P04264 644 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 RALAP11233 206 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 PGM1P36871 562 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 PEX3P56589 373 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 CAV1Q03135 178 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 ARSHQ5FYA8 562 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 XXYLT1Q8NBI6 393 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.1□□□□□ -0.95
ABCB1-210ENST00000543898 MIPOL1Q8TD10 442 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 FAM20AQ96MK3 541 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 ACCSQ96QU6 501 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 VCX3BQ9H321 246 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 EBF2Q9HAK2 575 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 VCX3AQ9NNX9 186 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 NEU2Q9Y3R4 380 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 ARFGEF2Q9Y6D5 1785 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 MYCLP12524 364 aaPredicted RBP9.1□□□□□ -0.95
ABCB1-210ENST00000543898 BMP3P12645 472 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 PTDSS1P48651 473 aaKnown RBP9.1□□□□□ -0.95
ABCB1-210ENST00000543898 ARSEP51690 589 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 KDSRQ06136 332 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 RASA3Q14644 834 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.1□□□□□ -0.95
ABCB1-210ENST00000543898 XKR9Q5GH70 373 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 CENPUQ71F23 418 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 PAF1Q8N7H5 531 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 KAT5Q92993 513 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 SMYD3Q9H7B4 428 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 C2CD2Q9Y426 696 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 CCDC22O60826 627 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 INHBAP08476 426 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 VHLP40337 213 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 SLC12A3P55017 1021 aa9.1□□□□□ -0.95
ABCB1-210ENST00000543898 NOP14P78316 857 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms