RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 CNNM4Q6P4Q7 775 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.77■□□□□ 0.44
CIT-212ENST00000543239 ADAMTS19Q8TE59 1207 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 STRA6Q9BX79 667 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 TRIM9Q9C026 710 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
CIT-212ENST00000543239 PANK4Q9NVE7 773 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 CNTN3Q9P232 1028 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 ADAM28Q9UKQ2 775 aa17.77■□□□□ 0.44
CIT-212ENST00000543239 SMIM28A0A1B0GU29 152 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 CASTOR2A6NHX0 329 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 POLR2DO15514 142 aaKnown RBP17.76■□□□□ 0.43
CIT-212ENST00000543239 GLP2RO95838 553 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 URODP06132 367 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 CLTAP09496 248 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 KCNE1P15382 129 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 NUCB2P80303 420 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 DLX2Q07687 328 aaPredicted RBP17.76■□□□□ 0.43
CIT-212ENST00000543239 PTPN14Q15678 1187 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 ZC2HC1CQ53FD0 456 aaPredicted RBP17.76■□□□□ 0.43
CIT-212ENST00000543239 HERC4Q5GLZ8 1057 aaPredicted RBP17.76■□□□□ 0.43
CIT-212ENST00000543239 GLRA4Q5JXX5 417 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 CCDC65Q8IXS2 484 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 GPR65Q8IYL9 337 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 MSLNLQ96KJ4 702 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 UROC1Q96N76 676 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 HAPLN2Q9GZV7 340 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 MRPL17Q9NRX2 175 aaKnown RBP17.76■□□□□ 0.43
CIT-212ENST00000543239 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 CLEC1BQ9P126 229 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 FAM50BQ9Y247 325 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 SSX2IPQ9Y2D8 614 aa17.76■□□□□ 0.43
CIT-212ENST00000543239 F8W810 466 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 DLL1O00548 723 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 OGTO15294 1046 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 CMA1P23946 247 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 CA8P35219 290 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 GLUD2P49448 558 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 COASYQ13057 564 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 SLFN12LQ6IEE8 588 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 PTCRAQ6ISU1 281 aaPredicted RBP17.75■□□□□ 0.43
CIT-212ENST00000543239 FUT10Q6P4F1 479 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 VN1R2Q8NFZ6 395 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 AUTS2Q8WXX7 1259 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 STAMQ92783 540 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 PAAF1Q9BRP4 392 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 PLEKHA5Q9HAU0 1116 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 CD207Q9UJ71 328 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 EXOC7Q9UPT5 735 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 PCDHB13Q9Y5F0 798 aa17.75■□□□□ 0.43
CIT-212ENST00000543239 SF3B1O75533 1304 aaKnown RBP eCLIP17.74■□□□□ 0.43
CIT-212ENST00000543239 A0A0B4J269 797 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 GRXCR2A6NFK2 248 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 TMEM189-UBE2V1I3L0A0 370 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 FAM189A1O60320 539 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 LILRB3O75022 631 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
CIT-212ENST00000543239 KIF4AO95239 1232 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 GCNT3O95395 438 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
CIT-212ENST00000543239 SLC10A6Q3KNW5 377 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 USP41Q3LFD5 358 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
CIT-212ENST00000543239 SLC39A4Q6P5W5 647 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 TMEM87AQ8NBN3 555 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 CASP10Q92851 521 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 C7orf25Q9BPX7 421 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 MSTO1Q9BUK6 570 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 CHST7Q9NS84 486 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
CIT-212ENST00000543239 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.74■□□□□ 0.43
CIT-212ENST00000543239 HCFC2Q9Y5Z7 792 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 STYXL1Q9Y6J8 313 aa17.74■□□□□ 0.43
CIT-212ENST00000543239 SPTBN5Q9NRC6 3674 aaKnown RBP17.73■□□□□ 0.43
CIT-212ENST00000543239 CITO14578 2027 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
CIT-212ENST00000543239 TADA2AO75478 443 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 ASIC1P78348 528 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 DSG1Q02413 1049 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 SMAD4Q13485 552 aaKnown RBP17.73■□□□□ 0.43
CIT-212ENST00000543239 SEZ6Q53EL9 994 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 KIAA0319Q5VV43 1072 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 STXBP4Q6ZWJ1 553 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 PPFIBP1Q86W92 1011 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 CEP57L1Q8IYX8 460 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 SMRP1Q8NCR6 262 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 RABGGTAQ92696 567 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
CIT-212ENST00000543239 ZMAT2Q96NC0 199 aaKnown RBP17.73■□□□□ 0.43
CIT-212ENST00000543239 ACCSQ96QU6 501 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 UHRF1Q96T88 793 aaPredicted RBP17.73■□□□□ 0.43
CIT-212ENST00000543239 GPR62Q9BZJ7 368 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 TBC1D7Q9P0N9 293 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 CACNG4Q9UBN1 327 aa17.73■□□□□ 0.43
CIT-212ENST00000543239 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms