RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CYP2C18P33260 490 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 DEKP35659 375 aaKnown RBP11.56□□□□□ -0.56
DDB1-221ENST00000543162 MXI1P50539 228 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 RAB27AP51159 221 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 AP3M2P53677 418 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 CCL23P55773 120 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 EXOC3L4Q17RC7 722 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 SLC10A6Q3KNW5 377 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 KRT39Q6A163 491 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 GBP6Q6ZN66 633 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 FAM43BQ6ZT52 329 aaPredicted RBP11.56□□□□□ -0.56
DDB1-221ENST00000543162 UBE2Q1Q7Z7E8 422 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 WDR49Q8IV35 697 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 CD302Q8IX05 232 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 SEPT8Q92599 483 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 FTHL17Q9BXU8 183 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 TMEM117Q9H0C3 514 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 WNT8AQ9H1J5 351 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 ASB7Q9H672 318 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 PLEKHA5Q9HAU0 1116 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 TMEM8AQ9HCN3 771 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 GCNT4Q9P109 453 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 IMPACTQ9P2X3 320 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 PARP2Q9UGN5 583 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.56□□□□□ -0.569e-7■□□□□ 9.6
DDB1-221ENST00000543162 TANC1Q9C0D5 1861 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 TTC26A0AVF1 554 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 PMM2O15305 246 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 MGEA5O60502 916 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 RECQL4O94761 1208 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 TPM1P09493 284 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 SKIP12755 728 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 ITGA4P13612 1032 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 AKAP5P24588 427 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 KLK7P49862 253 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
DDB1-221ENST00000543162 KCNMA1Q12791 1236 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 BIRC3Q13489 604 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 TRIM14Q14142 442 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 LMBRD2Q68DH5 695 aaPredicted RBP11.55□□□□□ -0.56
DDB1-221ENST00000543162 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 PPFIBP1Q86W92 1011 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 SMG8Q8ND04 991 aaKnown RBP11.55□□□□□ -0.56
DDB1-221ENST00000543162 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 SCLYQ96I15 445 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 SNX27Q96L92 541 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 TRAIPQ9BWF2 469 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 LSM14BQ9BX40 385 aaKnown RBP11.55□□□□□ -0.56
DDB1-221ENST00000543162 PRDM5Q9NQX1 630 aaPredicted RBP11.55□□□□□ -0.56
DDB1-221ENST00000543162 CITO14578 2027 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 PTPRJQ12913 1337 aa11.55□□□□□ -0.56
DDB1-221ENST00000543162 A0A0U1RQF3 1178 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 KIAA0355O15063 1070 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 MEFVO15553 781 aaPredicted RBP11.54□□□□□ -0.56
DDB1-221ENST00000543162 ZNF623O75123 536 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 PHACTR2O75167 634 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 TNNC2P02585 160 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 NFICP08651 508 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 TMEM191BP0C7N4 346 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 RAG1P15918 1043 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 TRIM21P19474 475 aaKnown RBP11.54□□□□□ -0.56
DDB1-221ENST00000543162 PON1P27169 355 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 RFC2P35250 354 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 GPNMBQ14956 572 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 TMEM132DQ14C87 1099 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 ZACNQ401N2 412 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 JADE1Q6IE81 842 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 MRPL10Q7Z7H8 261 aaKnown RBP11.54□□□□□ -0.56
DDB1-221ENST00000543162 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 FBXL13Q8NEE6 735 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 OR5B17Q8NGF7 314 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 CACTINQ8WUQ7 758 aaKnown RBP11.54□□□□□ -0.56
DDB1-221ENST00000543162 APBB2Q92870 758 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 IQCDQ96DY2 449 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 FAM84AQ96KN4 292 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 MTMR12Q9C0I1 747 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 INTS2Q9H0H0 1204 aaKnown RBP11.54□□□□□ -0.56
DDB1-221ENST00000543162 RNF39Q9H2S5 420 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 RGS18Q9NS28 235 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 FAM207AQ9NSI2 230 aaPredicted RBP11.54□□□□□ -0.56
DDB1-221ENST00000543162 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 DERAQ9Y315 318 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 ANK1P16157 1881 aa11.54□□□□□ -0.56
DDB1-221ENST00000543162 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 BRCA2P51587 3418 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TRIM43BA6NCK2 446 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TIMP1P01033 207 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 CXCL10P02778 98 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms