RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 MYO15AQ9UKN7 3530 aa19.19■□□□□ 0.66
PPP1CA-210ENST00000542876 TDRD15B5MCY1 1934 aaKnown RBP19.19■□□□□ 0.66
PPP1CA-210ENST00000542876 XYLBO75191 536 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 ST3GAL1Q11201 340 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 GRASPQ7Z6J2 395 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 LNX1Q8TBB1 728 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 CCDC113Q9H0I3 377 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 BHMT2Q9H2M3 363 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 POLIQ9UNA4 740 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 STK24Q9Y6E0 443 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 C2orf16Q68DN1 1984 aa19.18■□□□□ 0.66
PPP1CA-210ENST00000542876 KRBA1A5PL33 1030 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 ANHXE9PGG2 379 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 C8AP07357 584 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 TRAPPC10P48553 1259 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 HMGN5P82970 282 aaKnown RBP19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 HTR4Q13639 388 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 ATF7IP2Q5U623 682 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 GPR152Q8TDT2 470 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 KIFC3Q9BVG8 833 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 RAB34Q9BZG1 259 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 TBC1D17Q9HA65 648 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 LRWD1Q9UFC0 647 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 USP20Q9Y2K6 914 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 NUMBLQ9Y6R0 609 aa19.17■□□□□ 0.66
PPP1CA-210ENST00000542876 PLXNA3P51805 1871 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 K7ERI5 159 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 TRAPPC3O43617 180 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 B3GAT3O94766 335 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 HOXA9P31269 272 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 FXR2P51116 673 aaKnown RBP eCLIP19.16■□□□□ 0.663e-9■■□□□ 14.1
PPP1CA-210ENST00000542876 EEF1DP3Q658K8 133 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 DCLRE1AQ6PJP8 1040 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 FBXO18Q8NFZ0 1043 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 UROC1Q96N76 676 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 ARHGEF3Q9NR81 526 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 CDH7Q9ULB5 785 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 KIAA1024Q9UPX6 916 aa19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 RIF1Q5UIP0 2472 aaKnown RBP19.16■□□□□ 0.66
PPP1CA-210ENST00000542876 CFAP54Q96N23 3096 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 CCL16O15467 120 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 YARSP54577 528 aaKnown RBP19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 NAB2Q15742 525 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 UVSSAQ2YD98 709 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 GLRA4Q5JXX5 417 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 SLC7A14Q8TBB6 771 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 ZSCAN31Q96LW9 406 aaPredicted RBP19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 POLD4Q9HCU8 107 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 SLC2A4RGQ9NR83 387 aa19.15■□□□□ 0.66
PPP1CA-210ENST00000542876 CCDC169A6NNP5 214 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 TMEM189-UBE2V1I3L0A0 370 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 EDN1P05305 212 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 OR1D2P34982 312 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 RAB33AQ14088 237 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 PDIA5Q14554 519 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 AXDND1Q5T1B0 1012 aaPredicted RBP19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 ERICH6BQ5W0A0 696 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 PHLDB3Q6NSJ2 640 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 SNX29Q8TEQ0 813 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 SHDQ96IW2 340 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 CCDC94Q9BW85 323 aaPredicted RBP19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 CXCL16Q9H2A7 254 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 TOPORSQ9NS56 1045 aaPredicted RBP19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 TNFSF13BQ9Y275 285 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 SIT1Q9Y3P8 196 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 PHLPP2Q6ZVD8 1323 aa19.14■□□□□ 0.65
PPP1CA-210ENST00000542876 FGFR3P22607 806 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 CLCNKBP51801 687 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 NTHL1P78549 312 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 ECM1Q16610 540 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 SPECC1Q5M775 1068 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 NT5DC1Q5TFE4 455 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 ANKS3Q6ZW76 656 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 RTL10Q7L3V2 364 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 ADSSL1Q8N142 457 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 ST13P5Q8NFI4 369 aaPredicted RBP19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 PPP1R10Q96QC0 940 aaKnown RBP19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 SH2B1Q9NRF2 756 aaPredicted RBP19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 MTRRQ9UBK8 725 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 DNM3Q9UQ16 869 aa19.13■□□□□ 0.65
PPP1CA-210ENST00000542876 ADAM12O43184 909 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 POU2F2P09086 479 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 PEX3P56589 373 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 DMP1Q13316 513 aaPredicted RBP19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 UPP1Q16831 310 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 ZNF568Q3ZCX4 644 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 KRT79Q5XKE5 535 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 PARM1Q6UWI2 310 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 FGF13Q92913 245 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 FGF14Q92915 247 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 DDX27Q96GQ7 796 aaKnown RBP19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 MRPL4Q9BYD3 311 aaKnown RBP19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 SEMA4AQ9H3S1 761 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 SLC38A7Q9NVC3 462 aa19.12■□□□□ 0.65
PPP1CA-210ENST00000542876 BACE2Q9Y5Z0 518 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms