RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 LRWD1Q9UFC0 647 aa17.69■□□□□ 0.42
DDX11-222ENST00000542777 FBXW11Q9UKB1 542 aa17.69■□□□□ 0.42
DDX11-222ENST00000542777 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
DDX11-222ENST00000542777 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 FXR2P51116 673 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX11-222ENST00000542777 EFNA5P52803 228 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 NBR1Q14596 966 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 DCAF4L1Q3SXM0 396 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 NT5DC1Q5TFE4 455 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 CCDC105Q8IYK2 499 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 KIFAP3Q92845 792 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 DAXXQ9UER7 740 aaPredicted RBP17.68■□□□□ 0.42
DDX11-222ENST00000542777 CA14Q9ULX7 337 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 KIAA1024Q9UPX6 916 aa17.68■□□□□ 0.42
DDX11-222ENST00000542777 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 KRBA1A5PL33 1030 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 SRFP11831 508 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 FSHRP23945 695 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 PDIA5Q14554 519 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 LIN9Q5TKA1 542 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 PDXDC1Q6P996 788 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 GRASPQ7Z6J2 395 aaPredicted RBP17.67■□□□□ 0.42
DDX11-222ENST00000542777 DTWD2Q8NBA8 298 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 DDX19AQ9NUU7 478 aaKnown RBP17.67■□□□□ 0.42
DDX11-222ENST00000542777 TRIP11Q15643 1979 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 USP34Q70CQ2 3546 aa17.67■□□□□ 0.42
DDX11-222ENST00000542777 VWA8A3KMH1 1905 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 ZFHX2Q9C0A1 2572 aaPredicted RBP17.66■□□□□ 0.42
DDX11-222ENST00000542777 PRR23AA6NEV1 266 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 ANHXE9PGG2 379 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 K7ERI5 159 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 ADAM12O43184 909 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 C8AP07357 584 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 HNRNPA1P09651 372 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX11-222ENST00000542777 RFX1P22670 979 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 GLRA4Q5JXX5 417 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 PPM1LQ5SGD2 360 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.66■□□□□ 0.42
DDX11-222ENST00000542777 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
DDX11-222ENST00000542777 FRMD5Q7Z6J6 570 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 GPR152Q8TDT2 470 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 PPP1R10Q96QC0 940 aaKnown RBP17.66■□□□□ 0.42
DDX11-222ENST00000542777 SH2B1Q9NRF2 756 aaPredicted RBP17.66■□□□□ 0.42
DDX11-222ENST00000542777 STK24Q9Y6E0 443 aa17.66■□□□□ 0.42
DDX11-222ENST00000542777 ZFP37Q9Y6Q3 630 aaPredicted RBP17.66■□□□□ 0.42
DDX11-222ENST00000542777 CCL16O15467 120 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 B3GAT3O94766 335 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 FGFR3P22607 806 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 IGFBP6P24592 240 aaPredicted RBP17.65■□□□□ 0.42
DDX11-222ENST00000542777 OR1D2P34982 312 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 NTHL1P78549 312 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 PTGDRQ13258 359 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 HTR4Q13639 388 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 DCLRE1AQ6PJP8 1040 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 ST13P5Q8NFI4 369 aaPredicted RBP17.65■□□□□ 0.42
DDX11-222ENST00000542777 NKD2Q969F2 451 aaPredicted RBP17.65■□□□□ 0.42
DDX11-222ENST00000542777 RAB34Q9BZG1 259 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 TNFSF13BQ9Y275 285 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 NUMBLQ9Y6R0 609 aa17.65■□□□□ 0.42
DDX11-222ENST00000542777 CCDC169A6NNP5 214 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 E9PMD0 336 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 TMEM189-UBE2V1I3L0A0 370 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 XYLBO75191 536 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 U2AF2P26368 475 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDX11-222ENST00000542777 HOXA9P31269 272 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 TOB1P50616 345 aaPredicted RBP17.64■□□□□ 0.41
DDX11-222ENST00000542777 CLCNKBP51801 687 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 PEX3P56589 373 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 RAB33AQ14088 237 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 IGSF22Q8N9C0 903 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 UROC1Q96N76 676 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 TBC1D17Q9HA65 648 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 CDH7Q9ULB5 785 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 POLIQ9UNA4 740 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 DNM3Q9UQ16 869 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 PCDHB6Q9Y5E3 794 aa17.64■□□□□ 0.41
DDX11-222ENST00000542777 SMIM28A0A1B0GU29 152 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 NPTX2P47972 431 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 YARSP54577 528 aaKnown RBP17.63■□□□□ 0.41
DDX11-222ENST00000542777 UPP1Q16831 310 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
DDX11-222ENST00000542777 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 CD300LGQ6UXG3 332 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 CEP120Q8N960 986 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 SLC7A14Q8TBB6 771 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 ACO2Q99798 780 aaKnown RBP17.63■□□□□ 0.41
DDX11-222ENST00000542777 RPP25Q9BUL9 199 aaKnown RBP17.63■□□□□ 0.41
DDX11-222ENST00000542777 CCDC94Q9BW85 323 aaPredicted RBP17.63■□□□□ 0.41
DDX11-222ENST00000542777 TMEM134Q9H6X4 195 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 GOLGA2P5Q9HBQ8 144 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 SLC2A4RGQ9NR83 387 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 MTRRQ9UBK8 725 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 PHLPP2Q6ZVD8 1323 aa17.63■□□□□ 0.41
DDX11-222ENST00000542777 PP2D1A8MPX8 630 aa17.62■□□□□ 0.41
DDX11-222ENST00000542777 TRAPPC3O43617 180 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms