RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 CNKSR3Q6P9H4 555 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 CALML6Q8TD86 181 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 FERMT2Q96AC1 680 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 PWWP2AQ96N64 755 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 BTBD2Q9BX70 525 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 PRDM12Q9H4Q4 367 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 CD320Q9NPF0 282 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 SPATA6Q9NWH7 488 aaPredicted RBP10.22□□□□□ -0.77
MRPS35-204ENST00000542199 CNOT6Q9ULM6 557 aaKnown RBP10.22□□□□□ -0.77
MRPS35-204ENST00000542199 SMG5Q9UPR3 1016 aaKnown RBP10.22□□□□□ -0.77
MRPS35-204ENST00000542199 TNKSO95271 1327 aa10.22□□□□□ -0.77
MRPS35-204ENST00000542199 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 LOC100996750A0A140TA64 210 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 TCAF2A6NFQ2 919 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 FBXO21O94952 628 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 ANXA1P04083 346 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 MYBL2P10244 700 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 COL6A1P12109 1028 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 GPR3P46089 330 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 MLLT6P55198 1093 aaPredicted RBP10.21□□□□□ -0.77
MRPS35-204ENST00000542199 DLX2Q07687 328 aaPredicted RBP10.21□□□□□ -0.77
MRPS35-204ENST00000542199 ADCY2Q08462 1091 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 KRT24Q2M2I5 525 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 PARP10Q53GL7 1025 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 KANK2Q63ZY3 851 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 TIGD7Q6NT04 549 aaPredicted RBP10.21□□□□□ -0.77
MRPS35-204ENST00000542199 CCDC62Q6P9F0 684 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 KANSL1Q7Z3B3 1105 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 RTKN2Q8IZC4 609 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 KRTAP4-6Q9BYQ5 205 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 G3BP2Q9UN86 482 aaKnown RBP10.21□□□□□ -0.77
MRPS35-204ENST00000542199 KCTD3Q9Y597 815 aa10.21□□□□□ -0.77
MRPS35-204ENST00000542199 TIAM2Q8IVF5 1701 aa10.21□□□□□ -0.78
MRPS35-204ENST00000542199 HOXB7P09629 217 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 ADCY8P40145 1251 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 CD83Q01151 205 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 TTF1Q15361 905 aaPredicted RBP10.2□□□□□ -0.78
MRPS35-204ENST00000542199 STILQ15468 1287 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 PRR31Q5SQ13 230 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 KIAA1841Q6NSI8 718 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 COPS6Q7L5N1 327 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 ZCCHC14Q8WYQ9 949 aaKnown RBP10.2□□□□□ -0.78
MRPS35-204ENST00000542199 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 PSMD1Q99460 953 aa10.2□□□□□ -0.78
MRPS35-204ENST00000542199 DDX21Q9NR30 783 aaKnown RBP eCLIP10.2□□□□□ -0.78
MRPS35-204ENST00000542199 ZNF277Q9NRM2 450 aaPredicted RBP10.2□□□□□ -0.78
MRPS35-204ENST00000542199 CCM2LQ9NUG4 571 aaPredicted RBP10.2□□□□□ -0.78
MRPS35-204ENST00000542199 NUP98P52948 1817 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 RNF123Q5XPI4 1314 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 FZD9O00144 591 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 DDNO94850 711 aaPredicted RBP10.19□□□□□ -0.78
MRPS35-204ENST00000542199 LPLP06858 475 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 ZNF853P0CG23 659 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 APEX1P27695 318 aaKnown RBP10.19□□□□□ -0.78
MRPS35-204ENST00000542199 VWA3BQ502W6 1294 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 HSP90AB3PQ58FF7 597 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 PITRM1Q5JRX3 1037 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 SLC10A5Q5PT55 438 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 PPP1R42Q7Z4L9 355 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 ADGRG2Q8IZP9 1017 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 RPGRQ92834 1020 aaKnown RBP10.19□□□□□ -0.78
MRPS35-204ENST00000542199 CRAMP1Q96RY5 1269 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 WRNIP1Q96S55 665 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 UTP14AQ9BVJ6 771 aaKnown RBP10.19□□□□□ -0.78
MRPS35-204ENST00000542199 EDARQ9UNE0 448 aa10.19□□□□□ -0.78
MRPS35-204ENST00000542199 DICER1Q9UPY3 1922 aaKnown RBP10.18□□□□□ -0.78
MRPS35-204ENST00000542199 KNG1P01042 644 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 ENPP1P22413 925 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 NEK2P51955 445 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 TCIRG1Q13488 830 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 FSCN1Q16658 493 aaKnown RBP10.18□□□□□ -0.78
MRPS35-204ENST00000542199 PTPN21Q16825 1174 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 SYNE4Q8N205 404 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 C1orf162Q8NEQ5 155 aaPredicted RBP10.18□□□□□ -0.78
MRPS35-204ENST00000542199 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 EAF2Q96CJ1 260 aaPredicted RBP10.18□□□□□ -0.78
MRPS35-204ENST00000542199 ACAP3Q96P50 834 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 PPP1R16BQ96T49 567 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 SLC38A3Q99624 504 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 QRSL1Q9H0R6 528 aaKnown RBP10.18□□□□□ -0.78
MRPS35-204ENST00000542199 CHPF2Q9P2E5 772 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 MAGEL2Q9UJ55 1249 aa10.18□□□□□ -0.78
MRPS35-204ENST00000542199 LAS1LQ9Y4W2 734 aaKnown RBP10.18□□□□□ -0.78
MRPS35-204ENST00000542199 CCDC88AQ3V6T2 1871 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 ZNF541Q9H0D2 1346 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 APAF1O14727 1248 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 TSPAN15O95858 294 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 CELA3BP08861 270 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 LINC00310P59036 64 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 AIMP1Q12904 312 aaKnown RBP10.17□□□□□ -0.78
MRPS35-204ENST00000542199 PCBP2Q15366 365 aaKnown RBP eCLIP10.17□□□□□ -0.78
MRPS35-204ENST00000542199 WDR72Q3MJ13 1102 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 PGM2L1Q6PCE3 622 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 TRMT10BQ6PF06 316 aaKnown RBP10.17□□□□□ -0.78
MRPS35-204ENST00000542199 SAPCD2Q86UD0 394 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 POU5F2Q8N7G0 328 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 FUBP3Q96I24 572 aaKnown RBP eCLIP10.17□□□□□ -0.78
MRPS35-204ENST00000542199 RBM17Q96I25 401 aaKnown RBP10.17□□□□□ -0.78
MRPS35-204ENST00000542199 MTG2Q9H4K7 406 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms