RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 SEZ6LQ9BYH1 1024 aa10.03□□□□□ -0.8
LDHA-220ENST00000542179 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
LDHA-220ENST00000542179 FAM49AQ9H0Q0 323 aaPredicted RBP10.03□□□□□ -0.8
LDHA-220ENST00000542179 MMRN2Q9H8L6 949 aa10.03□□□□□ -0.8
LDHA-220ENST00000542179 CEP72Q9P209 647 aa10.03□□□□□ -0.8
LDHA-220ENST00000542179 GRIN2DO15399 1336 aa10.03□□□□□ -0.8
LDHA-220ENST00000542179 PDE4DIPQ5VU43 2346 aa10.02□□□□□ -0.8
LDHA-220ENST00000542179 LRRIQ3A6PVS8 624 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 ESPNB1AK53 854 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 B4GALT5O43286 388 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 TSPAN1O60635 241 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 TRIM49P0CI25 452 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 TRIM49CP0CI26 452 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 SKILP12757 684 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 ARF4P18085 180 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 AXLP30530 894 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 HNRNPH3P31942 346 aaKnown RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 KRT9P35527 623 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 AP3M2P53677 418 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 CDK17Q00537 523 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 NCBP1Q09161 790 aaKnown RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 ITGA7Q13683 1181 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 NOLC1Q14978 699 aaKnown RBP eCLIP10.02□□□□□ -0.812e-8■■□□□ 11.9
LDHA-220ENST00000542179 SURF1Q15526 300 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 KIZQ2M2Z5 673 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 CBWD6Q4V339 395 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 CBWD3Q5JTY5 395 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 CBWD5Q5RIA9 395 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 KRT39Q6A163 491 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 GDF6Q6KF10 455 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 C15orf39Q6ZRI6 1047 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 RSPH3Q86UC2 560 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 TMEM139Q8IV31 216 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 SLC43A3Q8NBI5 491 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 ZNF397Q8NF99 534 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 LMO3Q8TAP4 145 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 KIAA1524Q8TCG1 905 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 SYN2Q92777 582 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 ZNF668Q96K58 619 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 GLT1D1Q96MS3 346 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 SCLT1Q96NL6 688 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 BAG1Q99933 345 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 CELF4Q9BZC1 486 aaKnown RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 TMEM117Q9H0C3 514 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 TMEM8AQ9HCN3 771 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 PAK6Q9NQU5 681 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 KCND1Q9NSA2 647 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 FAM207AQ9NSI2 230 aaPredicted RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 ABHD10Q9NUJ1 306 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 AGPAT5Q9NUQ2 364 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 ANKFY1Q9P2R3 1169 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 CPSF3Q9UKF6 684 aaKnown RBP10.02□□□□□ -0.81
LDHA-220ENST00000542179 MYO6Q9UM54 1294 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 PHF24Q9UPV7 400 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 COQ4Q9Y3A0 265 aa10.02□□□□□ -0.81
LDHA-220ENST00000542179 FRMPD3Q5JV73 1810 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 EPHB6O15197 1021 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 ARHGAP6O43182 974 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 ERLIN2O94905 339 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 SLC9A1P19634 815 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 RFX1P22670 979 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 MSNP26038 577 aaKnown RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 MATR3P43243 847 aaKnown RBP eCLIP10.01□□□□□ -0.81
LDHA-220ENST00000542179 GCLMP48507 274 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 ACOT2P49753 483 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 MYL7Q01449 175 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 TMEM62Q0P6H9 643 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 SNX17Q15036 470 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 MEA1Q16626 185 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 PTGISQ16647 500 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 ZNF568Q3ZCX4 644 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 FAM47CQ5HY64 1035 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 KLHDC7AQ5VTJ3 777 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 EEF1DP3Q658K8 133 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 TRIM65Q6PJ69 517 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 APBB1IPQ7Z5R6 666 aaPredicted RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 ZBTB33Q86T24 672 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 METTL3Q86U44 580 aaKnown RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 TMTC1Q8IUR5 882 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 BRSK2Q8IWQ3 736 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 SH3TC2Q8TF17 1288 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 PPP1R13LQ8WUF5 828 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 BAP1Q92560 729 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 CCDC127Q96BQ5 260 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 CRACR2AQ9BSW2 395 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 LSM14BQ9BX40 385 aaKnown RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 CDT1Q9H211 546 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 GANQ9H2C0 597 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 PDZD7Q9H5P4 517 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 SIX2Q9NPC8 291 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 RBAKQ9NYW8 714 aaPredicted RBP10.01□□□□□ -0.81
LDHA-220ENST00000542179 GCNT4Q9P109 453 aa10.01□□□□□ -0.81
LDHA-220ENST00000542179 PLAGL2Q9UPG8 496 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms