RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ALCAMQ13740 583 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 P3H1Q32P28 736 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 EPM2AIP1Q7L775 607 aaPredicted RBP17.13■□□□□ 0.33
VARS2-212ENST00000542001 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 OR6B3Q8NGW1 331 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 PPP1R13LQ8WUF5 828 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 EFCC1Q9HA90 598 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 CCDC195A0A1B0GUA6 201 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 TGS1Q96RS0 853 aaKnown RBP17.13■□□□□ 0.33
VARS2-212ENST00000542001 WNT8AQ9H1J5 351 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 CIITAP33076 1130 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 CDK17Q00537 523 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PDE1BQ01064 536 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 NCOA4Q13772 614 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PTGISQ16647 500 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 ICE2Q659A1 982 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 RBBP8NLQ8NC74 664 aaPredicted RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 ZBTB45Q96K62 511 aaPredicted RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 INPP5FQ9Y2H2 1132 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 BRD2P25440 801 aaKnown RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 CXCL9Q07325 125 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 SV2AQ7L0J3 742 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 MAML1Q92585 1016 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.332e-10■■□□□ 13.6
VARS2-212ENST00000542001 SLC13A1Q9BZW2 595 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 MYOZ2Q9NPC6 264 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 TBX20Q9UMR3 447 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 TMX2Q9Y320 296 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 UBE4BO95155 1302 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 CCDC78A2IDD5 438 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PEX10O60683 326 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PHF2O75151 1096 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 P4HA1P13674 534 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 STAT5BP51692 787 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 ITGA8P53708 1063 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
VARS2-212ENST00000542001 MUM1L1Q5H9M0 696 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 PPM1NQ8N819 430 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 GAKO14976 1311 aa17.12■□□□□ 0.33
VARS2-212ENST00000542001 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 PSMC4P43686 418 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 RARRES1P49788 294 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 SUPT20HL1Q3ZLR7 823 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 TTMPQ5BVD1 217 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 SDCCAG8Q86SQ7 713 aaPredicted RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 SPATS2Q86XZ4 545 aaKnown RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 RHOT1Q8IXI2 618 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 SEC16BQ96JE7 1060 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 CFAP57Q96MR6 1250 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 PRPSAP2O60256 369 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 SFNP31947 248 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 NUMBP49757 651 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 FAM182AQ5T1J6 154 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 RIT2Q99578 217 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 C10orf88Q9H8K7 445 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 NOD1Q9Y239 953 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 M0QYV0 167 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 PYGMP11217 842 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 FAM102AQ5T9C2 384 aaPredicted RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 PWWP2AQ96N64 755 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 OSBPL8Q9BZF1 889 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 FAM187AA6NFU0 413 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 TJP3O95049 919 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 CYP11B1P15538 503 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 IFI35P80217 286 aaPredicted RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 FAXCQ5TGI0 409 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 SLC13A5Q86YT5 568 aaPredicted RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 PPFIBP2Q8ND30 876 aa17.11■□□□□ 0.33
VARS2-212ENST00000542001 AENQ8WTP8 325 aaKnown RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 XPO6Q96QU8 1125 aaKnown RBP17.11■□□□□ 0.33
VARS2-212ENST00000542001 A6NJR5 290 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 GTF2H1P32780 548 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 MAPK7Q13164 816 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 CENPUQ71F23 418 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 RAPGEF5Q92565 580 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 FIS1Q9Y3D6 152 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms