RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 APOBEC2Q9Y235 224 aaKnown RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SSC5DA1L4H1 1573 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 CXCL11O14625 94 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 HGSO14964 777 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 ADAM23O75077 832 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 KRT37O76014 449 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 FKBP9O95302 570 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 RNASE1P07998 156 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 ERVFC1P60507 584 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 FAPQ12884 760 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 HDAC1Q13547 482 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 LRP8Q14114 963 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 STAT4Q14765 748 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 PKN2Q16513 984 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 ANKRD45Q5TZF3 282 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 STEAP3Q658P3 488 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 FKBP9P1Q75LS8 142 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 FASTKD5Q7L8L6 764 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 NLRX1Q86UT6 975 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 MAPKAPK5Q8IW41 473 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 AMOTL1Q8IY63 956 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 MIGA1Q8NAN2 632 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 NETO2Q8NC67 525 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 PIP4K2CQ8TBX8 421 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 SEC14L1Q92503 715 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 PLCD4Q9BRC7 762 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 BOCQ9BWV1 1114 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 CRNKL1Q9BZJ0 848 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 AS3MTQ9HBK9 375 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 SLC6A20Q9NP91 592 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 DDX4Q9NQI0 724 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 THG1LQ9NWX6 298 aaKnown RBP6.38□□□□□ -1.39
CPSF7-220ENST00000541963 SLC5A4Q9NY91 659 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 CTNND2Q9UQB3 1225 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 TTC41PQ6P2S7 1318 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 ATRNL1Q5VV63 1379 aa6.38□□□□□ -1.39
CPSF7-220ENST00000541963 COL2A1P02458 1487 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 FLT1P17948 1338 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF532Q9HCE3 1301 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF891A8MT65 544 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 EYA4O95677 639 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 MPOP05164 745 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ZFYP08048 801 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 PDGFRBP09619 1106 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 MSL3P1P0C860 447 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ITGB7P26010 798 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 TRHRP34981 398 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ADD2P35612 726 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 LSSP48449 732 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 CDKN1CP49918 316 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 JAM2P57087 298 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 DYNLL1P63167 89 aaKnown RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 TMEM62Q0P6H9 643 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 KIF22Q14807 665 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ATP13A4Q4VNC1 1196 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 CTU1Q7Z7A3 348 aaKnown RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ADGRA1Q86SQ6 560 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 SPATS2Q86XZ4 545 aaKnown RBP6.37□□□□□ -1.39
CPSF7-220ENST00000541963 TRIM48Q8IWZ4 208 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 PHOSPHO1Q8TCT1 267 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 PEX11GQ96HA9 241 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ERO1AQ96HE7 468 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 SMOC1Q9H4F8 434 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 PCIF1Q9H4Z3 704 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 ZHX2Q9Y6X8 837 aa6.37□□□□□ -1.39
CPSF7-220ENST00000541963 RFX7Q2KHR2 1363 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 NEMP1O14524 444 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 GPR39O43194 453 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 HYAL3O43820 417 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 ULK1O75385 1050 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 S100BP04271 92 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 CYBBP04839 570 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 ASNSP08243 561 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 BPIP17213 487 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 POU3F3P20264 500 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 SLC6A11P48066 632 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 MECP2P51608 486 aaKnown RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 TMPRSS15P98073 1019 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 DSG1Q02413 1049 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 SP3Q02447 781 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 NR1I3Q14994 352 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 IQSEC1Q6DN90 963 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 PAQR3Q6TCH7 311 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 ANKRD23Q86SG2 305 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 PTRH1Q86Y79 214 aaKnown RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 KBTBD3Q8NAB2 608 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 BRI3BPQ8WY22 251 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 KIRREL1Q96J84 757 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 PTPN18Q99952 460 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 RIOK1Q9BRS2 568 aaKnown RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 ATP8A2Q9NTI2 1148 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 MCM9Q9NXL9 1143 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 SAP30BPQ9UHR5 308 aaKnown RBP6.36□□□□□ -1.39
CPSF7-220ENST00000541963 SERPINB13Q9UIV8 391 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms