RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 FAM167AQ96KS9 214 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 FDXACB1Q9BRP7 624 aaPredicted RBP8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 AP5M1Q9H0R1 490 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 NDST4Q9H3R1 872 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 TOPORSQ9NS56 1045 aaPredicted RBP8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 AGPAT5Q9NUQ2 364 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 HSPBP1Q9NZL4 362 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 ARHGAP28Q9P2N2 729 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 TRIM17Q9Y577 477 aa8.43□□□□□ -1.06
AC005840.3-201ENST00000541888 CCDC66A2RUB6 948 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 GOLGA6L6A8MZA4 724 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 INO80B-WBP1J3KQ70 363 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 CETN3O15182 167 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 CBFA2T2O43439 604 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 GNRH1P01148 92 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 PNMA6AP0CW24 399 aaPredicted RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 EEF1GP26641 437 aaKnown RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 TNFSF9P41273 254 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 MATR3P43243 847 aaKnown RBP eCLIP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 PURAQ00577 322 aaKnown RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 SLC20A2Q08357 652 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 MTF1Q14872 753 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 EDRF1Q3B7T1 1238 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 VWA3BQ502W6 1294 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 FAM47CQ5HY64 1035 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 CT47A1Q5JQC4 288 aaPredicted RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 SPECC1LQ69YQ0 1117 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 GJB7Q6PEY0 223 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 MTHFD1LQ6UB35 978 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 LRRC8AQ8IWT6 810 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 FAM186BQ8IYM0 893 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 CEP120Q8N960 986 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 PSPC1Q8WXF1 523 aaKnown RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 POMGNT1Q8WZA1 660 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 WNT8BQ93098 351 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 CCDC127Q96BQ5 260 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 CPB2Q96IY4 423 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 SCLT1Q96NL6 688 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 ACCSQ96QU6 501 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 FAM213AQ9BRX8 229 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 INO80BQ9C086 356 aaPredicted RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 XPNPEP3Q9NQH7 507 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 HDAC6Q9UBN7 1215 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 AJAP1Q9UKB5 411 aaPredicted RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 ZNF215Q9UL58 517 aaPredicted RBP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 DOLKQ9UPQ8 538 aa8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.42□□□□□ -1.06
AC005840.3-201ENST00000541888 ANK1P16157 1881 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 K7ERI5 159 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 F2P00734 622 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 INHAP05111 366 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 XRCC5P13010 732 aaKnown RBP8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 RHOQP17081 205 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 SLC9A1P19634 815 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 IBSPP21815 317 aaPredicted RBP8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 LIG4P49917 911 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 NLRP11P59045 1033 aaKnown RBP8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 CCZ1BP86790 482 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 CCZ1P86791 482 aaPredicted RBP8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 SPAG1Q07617 926 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 KCNMA1Q12791 1236 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 TMEM132AQ24JP5 1023 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 FILIP1LQ4L180 1135 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 CBWD6Q4V339 395 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 CBWD3Q5JTY5 395 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 CBWD5Q5RIA9 395 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 NFRKBQ6P4R8 1299 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 HS2ST1Q7LGA3 356 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 MAP4K3Q8IVH8 894 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 TRIM59Q8IWR1 403 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 MSL3Q8N5Y2 521 aaKnown RBP8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 TC2NQ8N9U0 490 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 ANKRD20A12PQ8NF67 263 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 DNAJB3Q8WWF6 145 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 IFT122Q9HBG6 1241 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 NLRC4Q9NPP4 1024 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 RAB6BQ9NRW1 208 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 ARMCX3Q9UH62 379 aaPredicted RBP8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 SCN10AQ9Y5Y9 1956 aa8.41□□□□□ -1.06
AC005840.3-201ENST00000541888 IGKV6-21A0A0C4DH24 114 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 A0A0U1RQJ8 604 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 TTC26A0AVF1 554 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 USP27XA6NNY8 438 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 SEPT4O43236 478 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 FKTNO75072 461 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 ASGR1P07306 291 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 CTSHP09668 335 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 DLATP10515 647 aaKnown RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 RARBP10826 455 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 EPB41P11171 864 aaKnown RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 PPP1R2P41236 205 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 NAMPTP43490 491 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 CPT1AP50416 773 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms