RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 NHLH1Q02575 133 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 SOX4Q06945 474 aaPredicted RBP15.42■□□□□ 0.06
SUDS3-203ENST00000541591 DCAF4L1Q3SXM0 396 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 C1orf186Q6ZWK4 172 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 FBXL6Q8N531 539 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 RSAD2Q8WXG1 361 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 SMG7Q92540 1137 aaKnown RBP15.42■□□□□ 0.06
SUDS3-203ENST00000541591 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 ACO2Q99798 780 aaKnown RBP15.42■□□□□ 0.06
SUDS3-203ENST00000541591 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
SUDS3-203ENST00000541591 RXFP1Q9HBX9 757 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 FAM86C1Q9NVL1 165 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 ANKFY1Q9P2R3 1169 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 KIF3AQ9Y496 699 aa15.42■□□□□ 0.06
SUDS3-203ENST00000541591 SF3B1O75533 1304 aaKnown RBP eCLIP15.42■□□□□ 0.06
SUDS3-203ENST00000541591 ZMYM2Q9UBW7 1377 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 NARSO43776 548 aaKnown RBP15.41■□□□□ 0.06
SUDS3-203ENST00000541591 PRPHP41219 470 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 BRCC3P46736 316 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 NTHL1P78549 312 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 DMP1Q13316 513 aaPredicted RBP15.41■□□□□ 0.06
SUDS3-203ENST00000541591 MTMR3Q13615 1198 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 PSMD5Q16401 504 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 RILPL1Q5EBL4 403 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 GET4Q7L5D6 327 aaPredicted RBP15.41■□□□□ 0.06
SUDS3-203ENST00000541591 C3orf58Q8NDZ4 430 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 ZNF707Q96C28 371 aaPredicted RBP15.41■□□□□ 0.06
SUDS3-203ENST00000541591 MYADMQ96S97 322 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 SSX2IPQ9Y2D8 614 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 ZNF638Q14966 1978 aaKnown RBP15.41■□□□□ 0.06
SUDS3-203ENST00000541591 TICRRQ7Z2Z1 1910 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 CLUHO75153 1309 aa15.41■□□□□ 0.06
SUDS3-203ENST00000541591 VPS37CA5D8V6 355 aaPredicted RBP15.4■□□□□ 0.06
SUDS3-203ENST00000541591 LAD1O00515 517 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 MEFVO15553 781 aaPredicted RBP15.4■□□□□ 0.06
SUDS3-203ENST00000541591 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
SUDS3-203ENST00000541591 EFNA5P52803 228 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 SPAG1Q07617 926 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 LARP1BQ659C4 914 aaKnown RBP15.4■□□□□ 0.06
SUDS3-203ENST00000541591 ZDHHC14Q8IZN3 488 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 CDK5RAP3Q96JB5 506 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 ZMAT2Q96NC0 199 aaKnown RBP15.4■□□□□ 0.06
SUDS3-203ENST00000541591 PPP1R10Q96QC0 940 aaKnown RBP15.4■□□□□ 0.06
SUDS3-203ENST00000541591 CLSTN3Q9BQT9 956 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 TTPALQ9BTX7 342 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 ARHGAP28Q9P2N2 729 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
SUDS3-203ENST00000541591 CCL16O15467 120 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 TKTP29401 623 aaKnown RBP15.39■□□□□ 0.05
SUDS3-203ENST00000541591 SLC12A3P55017 1021 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 TMEM119Q4V9L6 283 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 CD300LGQ6UXG3 332 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 RSPO2Q6UXX9 243 aaPredicted RBP15.39■□□□□ 0.05
SUDS3-203ENST00000541591 BMP8AQ7Z5Y6 402 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 LNX1Q8TBB1 728 aaPredicted RBP15.39■□□□□ 0.05
SUDS3-203ENST00000541591 C18orf25Q96B23 403 aaPredicted RBP15.39■□□□□ 0.05
SUDS3-203ENST00000541591 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
SUDS3-203ENST00000541591 DRC1Q96MC2 740 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 TCHPQ9BT92 498 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 MRPL4Q9BYD3 311 aaKnown RBP15.39■□□□□ 0.05
SUDS3-203ENST00000541591 STK39Q9UEW8 545 aa15.39■□□□□ 0.05
SUDS3-203ENST00000541591 SMIM28A0A1B0GU29 152 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 ABLIM1O14639 778 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 B3GAT3O94766 335 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 GRM5P41594 1212 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
SUDS3-203ENST00000541591 TCF15Q12870 199 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 KARSQ15046 597 aaKnown RBP15.38■□□□□ 0.05
SUDS3-203ENST00000541591 ARSHQ5FYA8 562 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 SPECC1Q5M775 1068 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 FAM173BQ6P4H8 233 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 LILRA6Q6PI73 481 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 C15orf39Q6ZRI6 1047 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 OTOP3Q7RTS5 596 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 SNX27Q96L92 541 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 CCDC94Q9BW85 323 aaPredicted RBP15.38■□□□□ 0.05
SUDS3-203ENST00000541591 HAPLN2Q9GZV7 340 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 NT5C3AQ9H0P0 336 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 PTPRHQ9HD43 1115 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 FNIP2Q9P278 1114 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 POLIQ9UNA4 740 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 USTQ9Y2C2 406 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 ARIH1Q9Y4X5 557 aaPredicted RBP15.38■□□□□ 0.05
SUDS3-203ENST00000541591 STK24Q9Y6E0 443 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 DENND4CQ5VZ89 1909 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 PATJQ8NI35 1801 aa15.38■□□□□ 0.05
SUDS3-203ENST00000541591 OBSL1O75147 1896 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 AVPR2P30518 371 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 OR1D2P34982 312 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 YARSP54577 528 aaKnown RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 MCM6Q14566 821 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 SF3A1Q15459 793 aaKnown RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 HYIQ5T013 277 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 GRASPQ7Z6J2 395 aaPredicted RBP15.37■□□□□ 0.05
SUDS3-203ENST00000541591 GPBP1Q86WP2 473 aa15.37■□□□□ 0.05
SUDS3-203ENST00000541591 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms