RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 SLC6A4P31645 630 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 CLRN1P58418 232 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 RNASE9P60153 205 aaKnown RBP4.56□□□□□ -1.68
CUL3-214ENST00000541548 KRT85P78386 507 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 TARDBPQ13148 414 aaKnown RBP eCLIP4.56□□□□□ -1.68
CUL3-214ENST00000541548 ODF1Q14990 250 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 GDF7Q7Z4P5 450 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 PQLC1Q8N2U9 271 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 CASKIN2Q8WXE0 1202 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 TFAP2CQ92754 450 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 DPF2Q92785 391 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 MYEOVQ96EZ4 313 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 AGAP2Q99490 1192 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 ASPSCR1Q9BZE9 553 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 PCDH12Q9NPG4 1184 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 FBXO34Q9NWN3 711 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 AJAP1Q9UKB5 411 aaPredicted RBP4.56□□□□□ -1.68
CUL3-214ENST00000541548 ACTL7AQ9Y615 435 aa4.56□□□□□ -1.68
CUL3-214ENST00000541548 WASHC2AQ641Q2 1341 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 ZRANB2O95218 330 aaKnown RBP eCLIP4.55□□□□□ -1.68
CUL3-214ENST00000541548 HSP90B1P14625 803 aaKnown RBP4.55□□□□□ -1.68
CUL3-214ENST00000541548 GSPT1P15170 499 aaKnown RBP4.55□□□□□ -1.68
CUL3-214ENST00000541548 SLC6A2P23975 617 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 PTPN7P35236 360 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 CHN2P52757 468 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 NOMO1Q15155 1222 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 PCBP2Q15366 365 aaKnown RBP eCLIP4.55□□□□□ -1.68
CUL3-214ENST00000541548 SEM1Q6ZVN7 128 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 VRK3Q8IV63 474 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 NRG4Q8WWG1 115 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 STON2Q8WXE9 905 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 SSH1Q8WYL5 1049 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 CHFRQ96EP1 664 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 FAXDC2Q96IV6 333 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 DMRTA2Q96SC8 542 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 EPC1Q9H2F5 836 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 SPON1Q9HCB6 807 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 ALG13Q9NP73 1137 aaKnown RBP4.55□□□□□ -1.68
CUL3-214ENST00000541548 LANCL2Q9NS86 450 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 LIMCH1Q9UPQ0 1083 aa4.55□□□□□ -1.68
CUL3-214ENST00000541548 COL4A3Q01955 1670 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 WASHC2CQ9Y4E1 1318 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 NDUFS2O75306 463 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 ENDOD1O94919 500 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 ADH4P08319 380 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 PTGS2P35354 604 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 GUCY2FP51841 1108 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 HMGA2P52926 109 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 C3orf36Q3SXR2 165 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 B3GNTL1Q67FW5 361 aaPredicted RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 USP51Q70EK9 711 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 PDZD4Q76G19 769 aaPredicted RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 PLXDC1Q8IUK5 500 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 FAM177A1Q8N128 213 aaPredicted RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 HAS1Q92839 578 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 FUBP1Q96AE4 644 aaKnown RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 TEKT5Q96M29 485 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 DCLRE1CQ96SD1 692 aaKnown RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 MRI1Q9BV20 369 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 ADI1Q9BV57 179 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 AKIP1Q9NQ31 210 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 KLHL11Q9NVR0 708 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 SYBUQ9NX95 663 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 TRPM5Q9NZQ8 1165 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 VSX1Q9NZR4 365 aaPredicted RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 EIF2B4Q9UI10 523 aaKnown RBP4.54□□□□□ -1.68
CUL3-214ENST00000541548 CLCA2Q9UQC9 943 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 COL4A3BPQ9Y5P4 624 aa4.54□□□□□ -1.68
CUL3-214ENST00000541548 FOXN1O15353 648 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 HTRA2O43464 458 aaPredicted RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 GPR32O75388 356 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 SNRPA1P09661 255 aaKnown RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 FAM50AQ14320 339 aaKnown RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 GJC2Q5T442 439 aaPredicted RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 ATXN7L2Q5T6C5 722 aaPredicted RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 RNF187Q5TA31 235 aaPredicted RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 EFCAB12Q6NXP0 572 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 RHOT2Q8IXI1 618 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 OR56A1Q8NGH5 318 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 ZFP28Q8NHY6 868 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 IFI44Q8TCB0 444 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 RAB24Q969Q5 203 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 FUBP3Q96I24 572 aaKnown RBP eCLIP4.53□□□□□ -1.68
CUL3-214ENST00000541548 REXO2Q9Y3B8 237 aaKnown RBP4.53□□□□□ -1.68
CUL3-214ENST00000541548 SHROOM4Q9ULL8 1493 aa4.53□□□□□ -1.68
CUL3-214ENST00000541548 GAGE12BA1L429 117 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 GAGE12HA6NDE8 117 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 FAM171A2A8MVW0 826 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 DIRC3C9JPN6 131 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 ZFPL1O95159 310 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 CFIP05156 583 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 IL2RBP14784 551 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 GCSHP23434 173 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 MGAT1P26572 445 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 BMPR1AP36894 532 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 INHBCP55103 352 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 OCA2Q04671 838 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 SLFN5Q08AF3 891 aa4.52□□□□□ -1.69
CUL3-214ENST00000541548 DACT2Q5SW24 774 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms