RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 XKR9Q5GH70 373 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 PRR23BQ6ZRT6 265 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 ASAP3Q8TDY4 903 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 NELL2Q99435 816 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 LXNQ9BS40 222 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 ASPMQ8IZT6 3477 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 SF3B1O75533 1304 aaKnown RBP eCLIP13.12□□□□□ -0.316e-6■■■■■ 46.6
COPA-205ENST00000541366 M0R2N6 131 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 NCAM2O15394 837 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 ASAP2O43150 1006 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 P4HBP07237 508 aaKnown RBP13.11□□□□□ -0.31
COPA-205ENST00000541366 IFNAR1P17181 557 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 CEBPBP17676 345 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 HOXC13P31276 330 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 OR1D2P34982 312 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 DMWDQ09019 674 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 SRSF5Q13243 272 aaKnown RBP13.11□□□□□ -0.31
COPA-205ENST00000541366 CAPSQ13938 189 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 NPY5RQ15761 445 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 NETO1Q8TDF5 533 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 TCP11Q8WWU5 503 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 MTRQ99707 1265 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 RAB23Q9ULC3 237 aa13.11□□□□□ -0.31
COPA-205ENST00000541366 MRPS23Q9Y3D9 190 aaKnown RBP13.11□□□□□ -0.31
COPA-205ENST00000541366 CEP295Q9C0D2 2601 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 A0A087WWV3 80 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 PTGESO14684 152 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 ECI2O75521 394 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 RHOP08100 348 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 HOXA9P31269 272 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 IRX6P78412 446 aaPredicted RBP13.1□□□□□ -0.31
COPA-205ENST00000541366 SATB1Q01826 763 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
COPA-205ENST00000541366 TUSC3Q13454 348 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 KRT32Q14532 448 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 LAIR1Q6GTX8 287 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 C4orf19Q8IY42 314 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 JAKMIP1Q96N16 626 aaKnown RBP13.1□□□□□ -0.31
COPA-205ENST00000541366 FAM126AQ9BYI3 521 aaPredicted RBP13.1□□□□□ -0.31
COPA-205ENST00000541366 CHRDQ9H2X0 955 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 KCNMB3Q9NPA1 279 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 SEMA4GQ9NTN9 838 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
COPA-205ENST00000541366 FAM208BQ5VWN6 2430 aa13.1□□□□□ -0.31
COPA-205ENST00000541366 RETP07949 1114 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 GLRA2P23416 452 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 FCARP24071 287 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 RAB33AQ14088 237 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 GAS6Q14393 721 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 MXD4Q14582 209 aaPredicted RBP13.09□□□□□ -0.31
COPA-205ENST00000541366 EPHA7Q15375 998 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 NAB2Q15742 525 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 NCAPH2Q6IBW4 605 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 PRR23CQ6ZRP0 262 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
COPA-205ENST00000541366 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 CELF5Q8N6W0 485 aaKnown RBP13.09□□□□□ -0.31
COPA-205ENST00000541366 HAS1Q92839 578 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 C22orf23Q9BZE7 217 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 SNTG2Q9NY99 539 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 KCNH3Q9ULD8 1083 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 PPME1Q9Y570 386 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
COPA-205ENST00000541366 TICRRQ7Z2Z1 1910 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 HRO43593 1189 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPA-205ENST00000541366 DTNBO60941 627 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
COPA-205ENST00000541366 PDIA3P30101 505 aaKnown RBP13.08□□□□□ -0.32
COPA-205ENST00000541366 ARL2P36404 184 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 FNTBP49356 437 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 SIM2Q14190 667 aaPredicted RBP13.08□□□□□ -0.32
COPA-205ENST00000541366 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPA-205ENST00000541366 UVSSAQ2YD98 709 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 OTUD6AQ7L8S5 288 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 ELSPBP1Q96BH3 223 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
COPA-205ENST00000541366 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 GDE1Q9NZC3 331 aa13.08□□□□□ -0.32
COPA-205ENST00000541366 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms