RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PLA2G4DQ86XP0 818 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 CEP57Q86XR8 500 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 RHPN2Q8IUC4 686 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 CHCHD4Q8N4Q1 142 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 CCDC51Q96ER9 411 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 B3GALT6Q96L58 329 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 HNRNPABQ99729 332 aaKnown RBP10.6□□□□□ -0.71
YBX3-211ENST00000541351 CLSTN3Q9BQT9 956 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 ZNF577Q9BSK1 485 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 DKK4Q9UBT3 224 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 GIT1Q9Y2X7 761 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 ASXL3Q9C0F0 2248 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 FCARP24071 287 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 AXLP30530 894 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 CTHP32929 405 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 MLH1P40692 756 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 ABCG1P45844 678 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 GRSF1Q12849 480 aaKnown RBP eCLIP10.59□□□□□ -0.71
YBX3-211ENST00000541351 GRIK3Q13003 919 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 NMIQ13287 307 aaPredicted RBP10.59□□□□□ -0.71
YBX3-211ENST00000541351 AP3B2Q13367 1082 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 HSP90AA2PQ14568 343 aaPredicted RBP10.59□□□□□ -0.71
YBX3-211ENST00000541351 USP39Q53GS9 565 aaKnown RBP10.59□□□□□ -0.71
YBX3-211ENST00000541351 PRSS55Q6UWB4 352 aaPredicted RBP10.59□□□□□ -0.71
YBX3-211ENST00000541351 VITQ6UXI7 678 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 SRGAP1Q7Z6B7 1085 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 CCDC26Q8TAB7 109 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 NLRP4Q96MN2 994 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 GAD1Q99259 594 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 KIF2CQ99661 725 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 DSCC1Q9BVC3 393 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 TRIM6Q9C030 488 aaPredicted RBP10.59□□□□□ -0.71
YBX3-211ENST00000541351 TRPV4Q9HBA0 871 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 RAXQ9Y2V3 346 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 ZMYM2Q9UBW7 1377 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 MYH9P35579 1960 aaKnown RBP10.59□□□□□ -0.71
YBX3-211ENST00000541351 MYO18BQ8IUG5 2567 aa10.59□□□□□ -0.71
YBX3-211ENST00000541351 CCDC194A0A1B0GVG4 234 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 SPAARA0A1B0GVQ0 90 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 WDR27A2RRH5 827 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 SLC38A8A6NNN8 435 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 EXTL3O43909 919 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 ERLIN2O94905 339 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 PXNP49023 591 aaPredicted RBP10.58□□□□□ -0.72
YBX3-211ENST00000541351 SCNN1GP51170 649 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 PRKCEQ02156 737 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 ARHGAP29Q52LW3 1261 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 FAM171A1Q5VUB5 890 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 NOTUMQ6P988 496 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 RALYLQ86SE5 291 aaKnown RBP10.58□□□□□ -0.72
YBX3-211ENST00000541351 LNX1Q8TBB1 728 aaPredicted RBP10.58□□□□□ -0.72
YBX3-211ENST00000541351 CORO1BQ9BR76 489 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 ANO3Q9BYT9 981 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 SLITRK6Q9H5Y7 841 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 SUCLA2Q9P2R7 463 aaPredicted RBP10.58□□□□□ -0.72
YBX3-211ENST00000541351 EBF1Q9UH73 591 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 PCDHB9Q9Y5E1 797 aa10.58□□□□□ -0.72
YBX3-211ENST00000541351 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 WDR81Q562E7 1941 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 CYSRT1A8MQ03 144 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 HEPACAM2A8MVW5 462 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 DPYSL4O14531 572 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 PRRG1O14668 218 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 DDAH1O94760 285 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 APBB3O95704 486 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 PRB1P04280 392 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 SFNP31947 248 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 OR1D2P34982 312 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 SREBF1P36956 1147 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 AFF1P51825 1210 aaKnown RBP10.57□□□□□ -0.72
YBX3-211ENST00000541351 KCNC4Q03721 635 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 PON2Q15165 354 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 MAPK6Q16659 721 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 SLC5A9Q2M3M2 681 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 TRIM61Q5EBN2 209 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 PMS2CLQ68D20 193 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 LMBRD2Q68DH5 695 aaPredicted RBP10.57□□□□□ -0.72
YBX3-211ENST00000541351 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
YBX3-211ENST00000541351 KRT25Q7Z3Z0 450 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 RABEPKQ7Z6M1 372 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 PIP4P1Q86T03 277 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 TMEFF1Q8IYR6 380 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 ADAMTS14Q8WXS8 1223 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 ACDQ96AP0 544 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 TMEM209Q96SK2 561 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
YBX3-211ENST00000541351 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 APOBEC2Q9Y235 224 aaKnown RBP10.57□□□□□ -0.72
YBX3-211ENST00000541351 IPPQ9Y573 584 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 FREM2Q5SZK8 3169 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
YBX3-211ENST00000541351 LAMA5O15230 3695 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 A0A087WV48 116 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 ARHGEF37A1IGU5 675 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 HIP1O00291 1037 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 ARNTLO00327 626 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 DHX15O43143 795 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms