RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 INTUQ9ULD6 942 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 GGPS1O95749 300 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 COPB2P35606 906 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 ACTN3Q08043 901 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-227ENST00000541342 KCTD2Q14681 263 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 WDR78Q5VTH9 848 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 CCDC13Q8IYE1 715 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 PLEKHO2Q8TD55 490 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 TRIM51Q9BSJ1 452 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 POLR3FQ9H1D9 316 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-227ENST00000541342 FAM170AA1A519 330 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 F8VZ95 297 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 DDX3YO15523 660 aaKnown RBP18.45■□□□□ 0.54
SPIDR-227ENST00000541342 TGFB3P10600 412 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 EMC2Q15006 297 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 SLC39A4Q6P5W5 647 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 MICALCLQ6ZW33 695 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 GLYCTKQ8IVS8 523 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 EPB41L4BQ9H329 900 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 MROH8Q9H579 483 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 GMNCA6NCL1 334 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 FGGP02679 453 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 NEDD9Q14511 834 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 C1orf220Q5T0J3 134 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 TAS1R3Q7RTX0 852 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 XXYLT1Q8NBI6 393 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 DPH5Q9H2P9 285 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 YY1AP1Q9H869 796 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 TTC7AQ9ULT0 858 aaPredicted RBP18.45■□□□□ 0.54
SPIDR-227ENST00000541342 NCANO14594 1321 aa18.45■□□□□ 0.54
SPIDR-227ENST00000541342 PAEPP09466 180 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 RTP1P59025 263 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 PPP2R2AP63151 447 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 AGBL2Q5U5Z8 902 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 ARFGAP2Q8N6H7 521 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 SLC35G2Q8TBE7 412 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 BCCIPQ9P287 314 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 NOVA2Q9UNW9 492 aaKnown RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 CNGA1P29973 690 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 SNRPFP62306 86 aaKnown RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 DHX9Q08211 1270 aaKnown RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 RNF187Q5TA31 235 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 METTL7BQ6UX53 244 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 HVCN1Q96D96 273 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 CABS1Q96KC9 395 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 OSBPL7Q9BZF2 842 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 PLXNA1Q9UIW2 1896 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 GOLGA8IPA6NC78 632 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 GOLGA8JA6NMD2 632 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 ADRB2P07550 413 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 POLGP54098 1239 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 TMEM63BQ5T3F8 832 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 INTS8Q75QN2 995 aaKnown RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 PALB2Q86YC2 1186 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 FBXO16Q8IX29 292 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 RAPGEF5Q92565 580 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 TMEM143Q96AN5 459 aa18.44■□□□□ 0.54
SPIDR-227ENST00000541342 NIFKQ9BYG3 293 aaKnown RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 DHX33Q9H6R0 707 aaKnown RBP18.44■□□□□ 0.54
SPIDR-227ENST00000541342 PLXNB2O15031 1838 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 PDHXO00330 501 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 TCF7P36402 384 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-227ENST00000541342 MAGOHP61326 146 aaKnown RBP18.43■□□□□ 0.54
SPIDR-227ENST00000541342 PPP3CAQ08209 521 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 RUFY4Q6ZNE9 571 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 SYCE1Q8N0S2 351 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 LMBR1Q8WVP7 490 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 MAGOHBQ96A72 148 aaKnown RBP18.43■□□□□ 0.54
SPIDR-227ENST00000541342 SIP14410 1827 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 BTBD19C9JJ37 291 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 VAMP7P51809 220 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 MYL7Q01449 175 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 MTMR3Q13615 1198 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 LMO3Q8TAP4 145 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 ARHGEF26Q96DR7 871 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 ZDHHC18Q9NUE0 388 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 TAS2R14Q9NYV8 317 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 ARHGAP28Q9P2N2 729 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 EXOC7Q9UPT5 735 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 PPFIA2O75334 1257 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 RASSF9O75901 435 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 FERP16591 822 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 SOX5P35711 763 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 MNAT1P51948 309 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 HSDL1Q3SXM5 330 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 VPS36Q86VN1 386 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 SHCBP1Q8NEM2 672 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 BRI3BPQ8WY22 251 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 SAAL1Q96ER3 474 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 TRIM31Q9BZY9 425 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 INTS2Q9H0H0 1204 aaKnown RBP18.43■□□□□ 0.54
SPIDR-227ENST00000541342 PNMA3Q9UL41 463 aa18.43■□□□□ 0.54
SPIDR-227ENST00000541342 EMSYQ7Z589 1322 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 C5orf60A6NFR6 353 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 UNCXA6NJT0 531 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 H0YHG0 523 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 KRT13P13646 458 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 STAT5BP51692 787 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms