RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ANXA13P27216 316 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 SLC8A1P32418 973 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 ERFP50548 548 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 UGCGQ16739 394 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TRIM68Q6AZZ1 485 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 ZNF449Q6P9G9 518 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 MOXD1Q6UVY6 613 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 C4orf33Q8N1A6 199 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 UTP4Q969X6 686 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 COA1Q9GZY4 146 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 CYP11B1P15538 503 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 ITGB5P18084 799 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 STX2P32856 288 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 DRG2P55039 364 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 COPS2P61201 443 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 TNFAIP8L3Q5GJ75 292 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 KAZNQ674X7 775 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 NAALADL1Q9UQQ1 740 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 MIF4GDA9UHW6 222 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 TCP10L2B9ZVM9 353 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 PODXLO00592 558 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 IVDP26440 423 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 ZNF131P52739 623 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 RWDD2BP57060 319 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 CEP55Q53EZ4 464 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 NAIF1Q69YI7 327 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 RPAINQ86UA6 219 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 MKNK1Q9BUB5 465 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 ETNK1Q9HBU6 452 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 ADAM22Q9P0K1 906 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 MTUS1Q9ULD2 1270 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 GRID1Q9ULK0 1009 aa11.07□□□□□ -0.64
CDC42SE1-207ENST00000540998 POC1B-GALNT4F8VUJ3 575 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 RALAP11233 206 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 KRT10P13645 584 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 YY1P25490 414 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 ADSSP30520 456 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 WDR4P57081 412 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 SPOPLQ6IQ16 392 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 TAOK1Q7L7X3 1001 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 AGBL1Q96MI9 1066 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 CNOT7Q9UIV1 285 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GSTTP1A0A1W2PQM5 241 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 WDR91A4D1P6 747 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GOLGA8SH3BPF8 625 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GOLGA8MH3BSY2 632 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 SUN1O94901 812 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 MSH2P43246 934 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 CCNHP51946 323 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 SP4Q02446 784 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 BNIP1Q12981 228 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 SLMAPQ14BN4 828 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GALNTL6Q49A17 601 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 BZW1Q7L1Q6 419 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 KAT6AQ92794 2004 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 NACC1Q96RE7 527 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 NSRP1Q9H0G5 558 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 HOMER3Q9NSC5 361 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 HAO1Q9UJM8 370 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 DIS3Q9Y2L1 958 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 NUMBLQ9Y6R0 609 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 CBX6O95503 412 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 TTC4O95801 387 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 FOSP01100 380 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GM2AP17900 193 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 MAPK4P31152 587 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GAD2Q05329 585 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 HAUS6Q7Z4H7 955 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 FAM71AQ8IYT1 594 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 MICAL1Q8TDZ2 1067 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 ERP27Q96DN0 273 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 CSRNP1Q96S65 589 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 FHDC1Q9C0D6 1143 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 MYLK2Q9H1R3 596 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 EBF2Q9HAK2 575 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 TUFT1Q9NNX1 390 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 ALG13Q9NP73 1137 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 ANAPC5Q9UJX4 755 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
CDC42SE1-207ENST00000540998 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 FGFR1P11362 822 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 STAT2P52630 851 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 TAS2R40P59535 323 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 ZNF268Q14587 947 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 ZNF568Q3ZCX4 644 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms