RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SLC44A4Q53GD3 710 aa29.65■■■□□ 2.34
CHFR-218ENST00000540963 CDCA2Q69YH5 1023 aaPredicted RBP29.65■■■□□ 2.34
CHFR-218ENST00000540963 TNFRSF25Q93038 417 aa29.65■■■□□ 2.34
CHFR-218ENST00000540963 BRMS1Q9HCU9 246 aa29.65■■■□□ 2.34
CHFR-218ENST00000540963 GJB4Q9NTQ9 266 aa29.65■■■□□ 2.34
CHFR-218ENST00000540963 NOTCH4Q99466 2003 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 MED19A0JLT2 244 aaPredicted RBP29.64■■■□□ 2.34
CHFR-218ENST00000540963 LRRIQ4A6NIV6 560 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 N4BP3O15049 544 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 LAMTOR5O43504 91 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 KRT2P35908 639 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 RAB33AQ14088 237 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 CEP57Q86XR8 500 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 ZBTB8OSQ8IWT0 167 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 MCPH1Q8NEM0 835 aa29.64■■■□□ 2.34
CHFR-218ENST00000540963 CASTOR2A6NHX0 329 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 PTGESO14684 152 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 PFKFB2O60825 505 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 NTHL1P78549 312 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.63■■■□□ 2.33
CHFR-218ENST00000540963 GPR161Q8N6U8 529 aaKnown RBP29.63■■■□□ 2.33
CHFR-218ENST00000540963 NELL2Q99435 816 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 C2orf40Q9H1Z8 148 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 CACNG4Q9UBN1 327 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 PCDHGA2Q9Y5H1 932 aa29.63■■■□□ 2.33
CHFR-218ENST00000540963 LRRN2O75325 713 aa29.62■■■□□ 2.33
CHFR-218ENST00000540963 NR5A1Q13285 461 aa29.62■■■□□ 2.33
CHFR-218ENST00000540963 NAB2Q15742 525 aa29.62■■■□□ 2.33
CHFR-218ENST00000540963 PIGOQ8TEQ8 1089 aa29.62■■■□□ 2.33
CHFR-218ENST00000540963 HASPINQ8TF76 798 aa29.62■■■□□ 2.33
CHFR-218ENST00000540963 SPATA6Q9NWH7 488 aaPredicted RBP29.62■■■□□ 2.33
CHFR-218ENST00000540963 ORC3Q9UBD5 711 aaPredicted RBP29.62■■■□□ 2.33
CHFR-218ENST00000540963 FAM205CA6NFA0 338 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 TMEM189-UBE2V1I3L0A0 370 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 CCL16O15467 120 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 USO1O60763 962 aaKnown RBP29.61■■■□□ 2.33
CHFR-218ENST00000540963 SDHBP21912 280 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 RBM25P49756 843 aaKnown RBP29.61■■■□□ 2.33
CHFR-218ENST00000540963 AXDND1Q5T1B0 1012 aaPredicted RBP29.61■■■□□ 2.33
CHFR-218ENST00000540963 ST13P5Q8NFI4 369 aaPredicted RBP29.61■■■□□ 2.33
CHFR-218ENST00000540963 ITFG1Q8TB96 612 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 SLC7A14Q8TBB6 771 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 ADPGKQ9BRR6 497 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 PDZD7Q9H5P4 517 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 POLIQ9UNA4 740 aa29.61■■■□□ 2.33
CHFR-218ENST00000540963 FAM170BA6NMN3 283 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 NEMFO60524 1076 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 RECQL4O94761 1208 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 UBXN2BQ14CS0 331 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 DCLK2Q8N568 766 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 MTMR9Q96QG7 549 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 LTB4R2Q9NPC1 389 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 SNTG2Q9NY99 539 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 MTRRQ9UBK8 725 aa29.6■■■□□ 2.33
CHFR-218ENST00000540963 NCAM2O15394 837 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 FGFR3P22607 806 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 PRPF4BQ13523 1007 aaKnown RBP29.59■■■□□ 2.33
CHFR-218ENST00000540963 MAPK6Q16659 721 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 PABPC1LQ4VXU2 614 aaKnown RBP29.59■■■□□ 2.33
CHFR-218ENST00000540963 VARS2Q5ST30 1063 aaKnown RBP29.59■■■□□ 2.33
CHFR-218ENST00000540963 ZBTB41Q5SVQ8 909 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 NPAS3Q8IXF0 933 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 CLDN23Q96B33 292 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 TUFT1Q9NNX1 390 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 GPRC5CQ9NQ84 441 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 AVENQ9NQS1 362 aaPredicted RBP29.59■■■□□ 2.33
CHFR-218ENST00000540963 GDE1Q9NZC3 331 aa29.59■■■□□ 2.33
CHFR-218ENST00000540963 ADAM12O43184 909 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 ECI2O75521 394 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 CTDNEP1O95476 244 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 OR1D2P34982 312 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 TXKP42681 527 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 ZBTB44Q8NCP5 570 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 ATRIPQ8WXE1 791 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 NELL1Q92832 810 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 DNMT3BQ9UBC3 853 aaKnown RBP29.58■■■□□ 2.33
CHFR-218ENST00000540963 TPCN1Q9ULQ1 816 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 BACE2Q9Y5Z0 518 aa29.58■■■□□ 2.33
CHFR-218ENST00000540963 GPR179Q6PRD1 2367 aa29.57■■■□□ 2.32
CHFR-218ENST00000540963 ACKR2O00590 384 aa29.57■■■□□ 2.32
CHFR-218ENST00000540963 RPS9P46781 194 aaKnown RBP29.57■■■□□ 2.32
CHFR-218ENST00000540963 KXD1Q9BQD3 176 aa29.57■■■□□ 2.32
CHFR-218ENST00000540963 ZSCAN32Q9NX65 697 aa29.57■■■□□ 2.32
CHFR-218ENST00000540963 NCDNQ9UBB6 729 aa29.57■■■□□ 2.32
CHFR-218ENST00000540963 MTF2Q9Y483 593 aaPredicted RBP29.57■■■□□ 2.32
CHFR-218ENST00000540963 SPATA31C1P0DKV0 1188 aa29.56■■■□□ 2.32
CHFR-218ENST00000540963 ATP2B1P20020 1258 aa29.56■■■□□ 2.32
CHFR-218ENST00000540963 DCAF4L1Q3SXM0 396 aa29.56■■■□□ 2.32
CHFR-218ENST00000540963 SECISBP2LQ93073 1101 aaKnown RBP29.56■■■□□ 2.32
CHFR-218ENST00000540963 UROC1Q96N76 676 aa29.56■■■□□ 2.32
CHFR-218ENST00000540963 NACC1Q96RE7 527 aa29.56■■■□□ 2.32
CHFR-218ENST00000540963 CCDC113Q9H0I3 377 aa29.56■■■□□ 2.32
CHFR-218ENST00000540963 TRIP11Q15643 1979 aa29.55■■■□□ 2.32
CHFR-218ENST00000540963 TTLL13PA6NNM8 815 aa29.55■■■□□ 2.32
CHFR-218ENST00000540963 TRAPPC3O43617 180 aa29.55■■■□□ 2.32
CHFR-218ENST00000540963 LILRB5O75023 590 aa29.55■■■□□ 2.32
CHFR-218ENST00000540963 FDPSP14324 419 aaKnown RBP29.55■■■□□ 2.32
CHFR-218ENST00000540963 NAMPTP43490 491 aa29.55■■■□□ 2.32
CHFR-218ENST00000540963 CSTF1Q05048 431 aaKnown RBP29.55■■■□□ 2.32
CHFR-218ENST00000540963 ANKRD1Q15327 319 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms