RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 JAMLQ86YT9 394 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 CCNJLQ8IV13 435 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ABI1Q8IZP0 508 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 EPS8L3Q8TE67 593 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 U2AF1L4Q8WU68 220 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 TMEM47Q9BQJ4 181 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PLVAPQ9BX97 442 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PPP1R12CQ9BZL4 782 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ARHGEF3Q9NR81 526 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 FGFR1OP2Q9NVK5 253 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 COX16Q9P0S2 106 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 ANKFY1Q9P2R3 1169 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 CNOT7Q9UIV1 285 aaKnown RBP5.58□□□□□ -1.52
PROM1-220ENST00000540805 USH1CQ9Y6N9 552 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 SMCHD1A6NHR9 2005 aa5.58□□□□□ -1.52
PROM1-220ENST00000540805 PAPPA2Q9BXP8 1791 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PPP1R11O60927 126 aaPredicted RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 HIP1RO75146 1068 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FESP07332 822 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 UCHL3P15374 230 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 SHMT1P34896 483 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 SLCO1A2P46721 670 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CCNA1P78396 465 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CLUL1Q15846 466 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 DACT2Q5SW24 774 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 KCNK18Q7Z418 384 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ADAT2Q7Z6V5 191 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 C14orf80Q86SX3 495 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 LMNTD2Q8IXW0 634 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FAM81AQ8TBF8 368 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FBXO25Q8TCJ0 367 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 MGARPQ8TDB4 240 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FBF1Q8TES7 1133 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NAF1Q96HR8 494 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 RAB3IPQ96QF0 476 aaPredicted RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 MTMR9Q96QG7 549 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 GORASP1Q9BQQ3 440 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 TMEM109Q9BVC6 243 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 COA1Q9GZY4 146 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ADAM22Q9P0K1 906 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PARP2Q9UGN5 583 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ARL2BPQ9Y2Y0 163 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 MRPL11Q9Y3B7 192 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 TCP11X1B4DZS4 312 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 AFPP02771 609 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 SLC9A1P19634 815 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PAX3P23760 479 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CCNFP41002 786 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NT5C2P49902 561 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PRELPP51888 382 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CCNG1P51959 295 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 SESN3P58005 492 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NFIAQ12857 509 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 EXOC3L4Q17RC7 722 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CCDC38Q502W7 563 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 DCUN1D2Q6PH85 259 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ZDHHC24Q6UX98 284 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PPP1R21Q6ZMI0 780 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PPP4R3CPQ6ZMV5 832 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 C2orf69Q8N8R5 385 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 DNAJC19Q96DA6 116 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ERLEC1Q96DZ1 483 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FAM210AQ96ND0 272 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FAM193BQ96PV7 902 aaPredicted RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 SPZ1Q9BXG8 430 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 RXFP1Q9HBX9 757 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 DLGAP2Q9P1A6 1054 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NR2E1Q9Y466 385 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 KNL1Q8NG31 2342 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 RPTORQ8N122 1335 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ATRNL1Q5VV63 1379 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 BRCA2P51587 3418 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 MEIS1O00470 390 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 KIAA0391O15091 583 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 DDX3YO15523 660 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 TNFAIP3P21580 790 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FGFR4P22455 802 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 COPB2P35606 906 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 DRG2P55039 364 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 MAPK7Q13164 816 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 MTA1Q13330 715 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 PDIA5Q14554 519 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 RRP1BQ14684 758 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 MYBPC3Q14896 1274 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 LRRC14Q15048 493 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CDC42EP5Q6NZY7 148 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 GPBP1Q86WP2 473 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 TAB3Q8N5C8 712 aaPredicted RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 NEDD1Q8NHV4 660 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 SNRNP27Q8WVK2 155 aaKnown RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 RFFLQ8WZ73 363 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 ZNF653Q96CK0 615 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NUDT12Q9BQG2 462 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 AP5M1Q9H0R1 490 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 CARD9Q9H257 536 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.57□□□□□ -1.52
PROM1-220ENST00000540805 PI4KBQ9UBF8 816 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 FAM198AQ9UFP1 575 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms