RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 ZBTB42B2RXF5 422 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 USP8P40818 1118 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 Q3C1V9 767 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 CELF3Q5SZQ8 465 aaKnown RBP14.81□□□□□ -0.04
RTN3-210ENST00000540798 SEC14L1Q92503 715 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 DHX38Q92620 1227 aaKnown RBP14.81□□□□□ -0.04
RTN3-210ENST00000540798 CD101Q93033 1021 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 VPS18Q9P253 973 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 GTF3C4Q9UKN8 822 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 SCN4AP35499 1836 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 LRRIQ4A6NIV6 560 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 MIF4GDA9UHW6 222 aaKnown RBP14.81□□□□□ -0.04
RTN3-210ENST00000540798 FAM189A1O60320 539 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 YBX3P16989 372 aaKnown RBP eCLIP14.81□□□□□ -0.042e-9■□□□□ 10.1
RTN3-210ENST00000540798 ECHS1P30084 290 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 GGCXP38435 758 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 ZPBP2Q6X784 338 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 PLPPR4Q7Z2D5 763 aa14.81□□□□□ -0.04
RTN3-210ENST00000540798 TSEN2Q8NCE0 465 aaKnown RBP14.81□□□□□ -0.04
RTN3-210ENST00000540798 ZBTB45Q96K62 511 aaPredicted RBP14.81□□□□□ -0.04
RTN3-210ENST00000540798 MPHOSPH6Q99547 160 aaKnown RBP14.81□□□□□ -0.04
RTN3-210ENST00000540798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■■■■■ 88.9
RTN3-210ENST00000540798 KRIT1O00522 736 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 SART1O43290 800 aaKnown RBP14.8□□□□□ -0.04
RTN3-210ENST00000540798 NF2P35240 595 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 GYS2P54840 703 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ERVK-9P63128 1117 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 CLUL1Q15846 466 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ALS2CLQ60I27 953 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ACAD10Q6JQN1 1059 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 CCDC62Q6P9F0 684 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 KLHL7Q8IXQ5 586 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ALG3Q92685 438 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 CGRRF1Q99675 332 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 PI4K2AQ9BTU6 479 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 AP1M1Q9BXS5 423 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 CTTNBP2NLQ9P2B4 639 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 NFU1Q9UMS0 254 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 PLXNA1Q9UIW2 1896 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 GAS2O43903 313 aaKnown RBP14.8□□□□□ -0.04
RTN3-210ENST00000540798 HLA-DRAP01903 254 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ITGA4P13612 1032 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ACO1P21399 889 aaKnown RBP14.8□□□□□ -0.04
RTN3-210ENST00000540798 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
RTN3-210ENST00000540798 CLEC16AQ2KHT3 1053 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 C9orf131Q5VYM1 1079 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 FASTKD5Q7L8L6 764 aaKnown RBP14.8□□□□□ -0.04
RTN3-210ENST00000540798 ZNF677Q86XU0 584 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 TARS2Q9BW92 718 aaKnown RBP14.8□□□□□ -0.04
RTN3-210ENST00000540798 C1orf112Q9NSG2 853 aa14.8□□□□□ -0.04
RTN3-210ENST00000540798 ESYT3A0FGR9 886 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 MSCO60682 206 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 RNF40O75150 1001 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 UNGP13051 313 aaPredicted RBP14.79□□□□□ -0.04
RTN3-210ENST00000540798 ACOT2P49753 483 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 PEX5P50542 639 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 GRM1Q13255 1194 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 DRP2Q13474 957 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 ZBTB41Q5SVQ8 909 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 IER5Q5VY09 327 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 WHAMMQ8TF30 809 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 OPTNQ96CV9 577 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 RNPC3Q96LT9 517 aaKnown RBP14.79□□□□□ -0.04
RTN3-210ENST00000540798 TAF1DQ9H5J8 278 aaPredicted RBP14.79□□□□□ -0.04
RTN3-210ENST00000540798 RBAKQ9NYW8 714 aaPredicted RBP14.79□□□□□ -0.04
RTN3-210ENST00000540798 UVRAGQ9P2Y5 699 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 CNTN6Q9UQ52 1028 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 ANK1P16157 1881 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 GOLGA6BA6NDN3 693 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 PGK2P07205 417 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 FAM153BP0C7A2 387 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 OSBPP22059 807 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 EFNA5P52803 228 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 CUL1Q13616 776 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 FAM153CQ494X1 144 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 FAM84AQ96KN4 292 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 FNBP1Q96RU3 617 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 ZSWIM1Q9BR11 485 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 MSTO1Q9BUK6 570 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 MROH8Q9H579 483 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 FAM153AQ9UHL3 310 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 FGGP02679 453 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 CTNNA2P26232 953 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 TRADDQ15628 312 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 HSDL1Q3SXM5 330 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 LDLRAD1Q5T700 205 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 EXOC8Q8IYI6 725 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 SHCBP1Q8NEM2 672 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 PRPF31Q8WWY3 499 aaKnown RBP14.79□□□□□ -0.04
RTN3-210ENST00000540798 ELMO3Q96BJ8 720 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 MMP19Q99542 508 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 PLXNB2O15031 1838 aa14.79□□□□□ -0.04
RTN3-210ENST00000540798 ABLIM1O14639 778 aa14.78□□□□□ -0.04
RTN3-210ENST00000540798 PTENP60484 403 aa14.78□□□□□ -0.04
RTN3-210ENST00000540798 NAP1L3Q99457 506 aaPredicted RBP14.78□□□□□ -0.04
RTN3-210ENST00000540798 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
RTN3-210ENST00000540798 AZI2Q9H6S1 392 aa14.78□□□□□ -0.04
RTN3-210ENST00000540798 TRPC6Q9Y210 931 aa14.78□□□□□ -0.04
RTN3-210ENST00000540798 TNNI1P19237 187 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms