RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 A0A087WWV3 80 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 C2CD2LO14523 706 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 TEX28O15482 410 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 CLDN3O15551 220 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 LILRB3O75022 631 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 XYLBO75191 536 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 BRD1O95696 1058 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 PLA2G4BP0C869 781 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 EPCAMP16422 314 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 PLA2G5P39877 138 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 MATR3P43243 847 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 ZXDAP98168 799 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 NOLC1Q14978 699 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 KRI1Q8N9T8 703 aaKnown RBP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 AUTS2Q8WXX7 1259 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 RIN2Q8WYP3 895 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 BSNDQ8WZ55 320 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 KCNN1Q92952 543 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 BICD1Q96G01 975 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 ACO2Q99798 780 aaKnown RBP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 OXCT2Q9BYC2 517 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 LRRC27Q9C0I9 530 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 PIDD1Q9HB75 910 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 MAN1C1Q9NR34 630 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 MARCH5Q9NX47 278 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDCA3-208ENST00000540683 KLK14Q9P0G3 267 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
CDCA3-208ENST00000540683 MYH11P35749 1972 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 C5orf42Q9H799 3197 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 TMEM221A6NGB7 291 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 M0R296 226 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 FAM13AO94988 1023 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
CDCA3-208ENST00000540683 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 AFF1P51825 1210 aaKnown RBP11.37□□□□□ -0.59
CDCA3-208ENST00000540683 UVSSAQ2YD98 709 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 TMEM119Q4V9L6 283 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 TMC5Q6UXY8 1006 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 CDR2LQ86X02 465 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-208ENST00000540683 CD302Q8IX05 232 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 GSTCDQ8NEC7 633 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 BCL7CQ8WUZ0 217 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-208ENST00000540683 PIK3R5Q8WYR1 880 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 RUSC1Q9BVN2 902 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 PARVGQ9HBI0 331 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 STK17AQ9UEE5 414 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 MAFFQ9ULX9 164 aa11.37□□□□□ -0.59
CDCA3-208ENST00000540683 MORC2Q9Y6X9 1032 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-208ENST00000540683 CCDC195A0A1B0GUA6 201 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 CASTOR2A6NHX0 329 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 PP2D1A8MPX8 630 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 H7C4K7 107 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 SLC16A4O15374 487 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 B3GAT3O94766 335 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 EFEMP2O95967 443 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 POU2F2P09086 479 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 KCNE1P15382 129 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 HOXA9P31269 272 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 LIG4P49917 911 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 RBM10P98175 930 aaKnown RBP11.36□□□□□ -0.59
CDCA3-208ENST00000540683 POU5F1Q01860 360 aaKnown RBP11.36□□□□□ -0.59
CDCA3-208ENST00000540683 SF3A1Q15459 793 aaKnown RBP11.36□□□□□ -0.59
CDCA3-208ENST00000540683 PSMD5Q16401 504 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 ECM1Q16610 540 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 NT5DC1Q5TFE4 455 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 FAM171A1Q5VUB5 890 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 SLFN12LQ6IEE8 588 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 CCDC73Q6ZRK6 1079 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 GPBP1Q86WP2 473 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 CEP57Q86XR8 500 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 APPL2Q8NEU8 664 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 MMTAG2Q9BU76 263 aaKnown RBP11.36□□□□□ -0.59
CDCA3-208ENST00000540683 APOL5Q9BWW9 433 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 VN1R3Q9BXE9 311 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 BACH2Q9BYV9 841 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 CCSER1Q9C0I3 900 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 POMKQ9H5K3 350 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 PTPRHQ9HD43 1115 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 MIOSQ9NXC5 875 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 NUB1Q9Y5A7 615 aa11.36□□□□□ -0.59
CDCA3-208ENST00000540683 SMIM28A0A1B0GU29 152 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 RBAK-RBAKDNI3L0D1 243 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 K7ELQ4 463 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-208ENST00000540683 PTGESO14684 152 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 HNRNPDLO14979 420 aaKnown RBP11.35□□□□□ -0.59
CDCA3-208ENST00000540683 SYN3O14994 580 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 B4GALT3O60512 393 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 PAPLNO95428 1278 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 CLTAP09496 248 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 MAPTP10636 758 aaKnown RBP11.35□□□□□ -0.59
CDCA3-208ENST00000540683 CDC25AP30304 524 aa11.35□□□□□ -0.59
CDCA3-208ENST00000540683 ELF1P32519 619 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms