RNA–Protein interactions for RNA: ENST00000540665.5

TTC28-AS1-221, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-221ENST00000540665 ZBTB33Q86T24 672 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 GPR65Q8IYL9 337 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ZBTB45Q96K62 511 aaPredicted RBP17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ACAP3Q96P50 834 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 STRA6Q9BX79 667 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SLC38A7Q9NVC3 462 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CNTN3Q9P232 1028 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 FAM50BQ9Y247 325 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 TMEM189-UBE2V1I3L0A0 370 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PER2O15055 1255 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 KCNE1P15382 129 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 AMPD3Q01432 767 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 DLX2Q07687 328 aaPredicted RBP17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 COASYQ13057 564 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 EP400NLQ6ZTU2 488 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 LEO1Q8WVC0 666 aaPredicted RBP17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 DHX58Q96C10 678 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 UROC1Q96N76 676 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 HAPLN2Q9GZV7 340 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 MRPL44Q9H9J2 332 aaKnown RBP17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CLEC1BQ9P126 229 aa17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.42
TTC28-AS1-221ENST00000540665 DENND4AQ7Z401 1863 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SMIM28A0A1B0GU29 152 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 GRXCR2A6NFK2 248 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 DLL1O00548 723 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CXCL14O95715 111 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 URODP06132 367 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 HARSP12081 509 aaKnown RBP17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 IDEP14735 1019 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 GLUD2P49448 558 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 OSTNP61366 133 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SMAD4Q13485 552 aaKnown RBP17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ADALQ6DHV7 355 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PTCRAQ6ISU1 281 aaPredicted RBP17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 VN1R2Q8NFZ6 395 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SCAND2PQ9GZW5 306 aaPredicted RBP17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CHST7Q9NS84 486 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PANK4Q9NVE7 773 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CD207Q9UJ71 328 aa17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.67■□□□□ 0.42
TTC28-AS1-221ENST00000540665 A0A0B4J269 797 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CASTOR2A6NHX0 329 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 F8W810 466 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 OGTO15294 1046 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 POLR2DO15514 142 aaKnown RBP17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 MBTPS2O43462 519 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 FAM189A1O60320 539 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 LILRB3O75022 631 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 KIF4AO95239 1232 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CLTAP09496 248 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 NUCB2P80303 420 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 DSG1Q02413 1049 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ZC2HC1CQ53FD0 456 aaPredicted RBP17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 GLRA4Q5JXX5 417 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SLC39A4Q6P5W5 647 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PPFIBP1Q86W92 1011 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SMRP1Q8NCR6 262 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CASP10Q92851 521 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 UHRF1Q96T88 793 aaPredicted RBP17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 EMILIN2Q9BXX0 1053 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 BARX2Q9UMQ3 279 aaPredicted RBP17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 HCFC2Q9Y5Z7 792 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 STYXL1Q9Y6J8 313 aa17.66■□□□□ 0.42
TTC28-AS1-221ENST00000540665 C5orf42Q9H799 3197 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CLASP2O75122 1294 aaKnown RBP17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CMA1P23946 247 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 CA8P35219 290 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ELAVL2Q12926 359 aaKnown RBP17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SLC10A6Q3KNW5 377 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 HERC4Q5GLZ8 1057 aaPredicted RBP17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 L1TD1Q5T7N2 865 aaKnown RBP17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 SLFN12LQ6IEE8 588 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 AUTS2Q8WXX7 1259 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 ZMAT2Q96NC0 199 aaKnown RBP17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 TSPAN18Q96SJ8 248 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 C7orf25Q9BPX7 421 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 GPR62Q9BZJ7 368 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 KCNH3Q9ULD8 1083 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 EXOC7Q9UPT5 735 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 PCDHB13Q9Y5F0 798 aa17.65■□□□□ 0.42
TTC28-AS1-221ENST00000540665 TTC26A0AVF1 554 aa17.64■□□□□ 0.41
TTC28-AS1-221ENST00000540665 TADA2AO75478 443 aa17.64■□□□□ 0.41
TTC28-AS1-221ENST00000540665 GCNT3O95395 438 aa17.64■□□□□ 0.41
TTC28-AS1-221ENST00000540665 C1RP00736 705 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms