RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 NR1D2Q14995 579 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 MAP3K21Q5TCX8 1036 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 USP13Q92995 863 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 GRAMD1AQ96CP6 724 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 FBXO6Q9NRD1 293 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 PHF24Q9UPV7 400 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 A6NHS1 94 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 AIM2O14862 343 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 PDGFRBP09619 1106 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SRGAP2CP0DJJ0 459 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SRGAP2BP0DMP2 458 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 BGNP21810 368 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 RIPOR1Q6ZS17 1223 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 USP37Q86T82 979 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SH3RF3Q8TEJ3 882 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 UBE2TQ9NPD8 197 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 PI4K2BG5E9Z4 385 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 HDAC4P56524 1084 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 CETN1Q12798 172 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 TAS2R42Q7RTR8 314 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SNF8Q96H20 258 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 POTEMA6NI47 508 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 PHF2O75151 1096 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 OR52Z1P0C646 297 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SLC9A1P19634 815 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 MAGP20916 626 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 NME3Q13232 169 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 PEX6Q13608 980 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 PDK1Q15118 436 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 IZUMO3Q5VZ72 239 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 RSAD2Q8WXG1 361 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 PIH1D3Q9NQM4 214 aaKnown RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 BASP1P80723 227 aaKnown RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 FOLH1Q04609 750 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 TRAF2Q12933 501 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.72□□□□□ -0.53
PBX1-212ENST00000540236 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
PBX1-212ENST00000540236 ADA2Q9NZK5 511 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 COL15A1P39059 1388 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
PBX1-212ENST00000540236 UTYO14607 1347 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 GOLGA8IPA6NC78 632 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 HOXD12P35452 270 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 MSX2P35548 267 aaPredicted RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 DAB2P98082 770 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 TXNRD1Q16881 649 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 ZSCAN18Q8TBC5 510 aaPredicted RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 ATP10BO94823 1461 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 HOXC9P31274 260 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 TRPC1P48995 793 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 OCA2Q04671 838 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 KCNH2Q12809 1159 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 PPP6R3Q5H9R7 873 aaPredicted RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 GPR141Q7Z602 305 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 SACM1LQ9NTJ5 587 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 NAALADL1Q9UQQ1 740 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 SMCO2A6NFE2 343 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 CSPG5O95196 566 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 ZWINTO95229 277 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 ATP2B4P23634 1241 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 ZNF200P98182 395 aaPredicted RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 SCARF1Q14162 830 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 LPIN1Q14693 890 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 RASA2Q15283 850 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 LCORLQ8N3X6 602 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 LZICQ8WZA0 190 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 TMA16Q96EY4 203 aaKnown RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 OSBPL8Q9BZF1 889 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 DHX36Q9H2U1 1008 aaKnown RBP11.71□□□□□ -0.53
PBX1-212ENST00000540236 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
PBX1-212ENST00000540236 KRT38O76015 456 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 CASP2P42575 452 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 ART3Q13508 389 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 TRIM59Q8IWR1 403 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 ZNF287Q9HBT7 754 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 VPS51Q9UID3 782 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 A0A0J9YVX5 310 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 PODXLO00592 558 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms