RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RWDD2BP57060 319 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 BBS9Q3SYG4 887 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-202ENST00000540010 MOV10L1Q9BXT6 1211 aaKnown RBP10.66□□□□□ -0.7
TRAF1-202ENST00000540010 IKZF4Q9H2S9 585 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 TMEM206Q9H813 350 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 VIPAS39Q9H9C1 493 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 FBXO40Q9UH90 709 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 ANAPC7Q9UJX3 599 aa10.66□□□□□ -0.7
TRAF1-202ENST00000540010 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-202ENST00000540010 CD58P19256 250 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 BASP1P80723 227 aaKnown RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ADCY2Q08462 1091 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MIS18BP1Q6P0N0 1132 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 CALN1Q9BXU9 219 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 GPRC5CQ9NQ84 441 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ZNF446Q9NWS9 450 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ASTN1O14525 1302 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 LOC102724159A0A0B4J2E5 919 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 SLC16A3O15427 465 aaKnown RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MAFGO15525 162 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 PEX10O60683 326 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 FTLP02792 175 aaPredicted RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 HSPA6P17066 643 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 SLC9A1P19634 815 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 LSP1P33241 339 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MDH1P40925 334 aaKnown RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ERFP50548 548 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 PMS2P54278 862 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 IRX4P78413 519 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 PWP2Q15269 919 aaKnown RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MEA1Q16626 185 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MOB2Q70IA6 237 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MIPOL1Q8TD10 442 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 FAM167BQ9BTA0 163 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 EDEM3Q9BZQ6 932 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 TTYH3Q9C0H2 523 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 KLC4Q9NSK0 619 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 CAPN6Q9Y6Q1 641 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 POLGP54098 1239 aaPredicted RBP10.65□□□□□ -0.7
TRAF1-202ENST00000540010 MTERF2Q49AM1 385 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 HAUS6Q7Z4H7 955 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ANKRD13AQ8IZ07 590 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 BBOF1Q8ND07 529 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 ATP2A3Q93084 1043 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 RNF34Q969K3 372 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 KMT5AQ9NQR1 393 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
TRAF1-202ENST00000540010 FER1L6Q2WGJ9 1857 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 RASA4BC9J798 803 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 DHX15O43143 795 aaKnown RBP10.65□□□□□ -0.71
TRAF1-202ENST00000540010 RASA4O43374 803 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 ABL1P00519 1130 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 PLS3P13797 630 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 BRAFP15056 766 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 KCNMA1Q12791 1236 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 KRT81Q14533 505 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 SLC18A3Q16572 532 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 UGCGQ16739 394 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 BRDTQ58F21 947 aaPredicted RBP10.65□□□□□ -0.71
TRAF1-202ENST00000540010 CYFIP1Q7L576 1253 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 EPM2AIP1Q7L775 607 aaPredicted RBP10.65□□□□□ -0.71
TRAF1-202ENST00000540010 RHOT2Q8IXI1 618 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 CHST13Q8NET6 341 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 AGPAT3Q9NRZ7 376 aa10.65□□□□□ -0.71
TRAF1-202ENST00000540010 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.71
TRAF1-202ENST00000540010 ZNF646O15015 1829 aaPredicted RBP10.64□□□□□ -0.71
TRAF1-202ENST00000540010 RASSF10A6NK89 507 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 IRF6O14896 467 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 STAM2O75886 525 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 TMEM191BP0C7N4 346 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 FECHP22830 423 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 HERVK_113P62684 666 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 CNTN2Q02246 1040 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 ALCAMQ13740 583 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 NOL9Q5SY16 702 aaKnown RBP10.64□□□□□ -0.71
TRAF1-202ENST00000540010 PASD1Q8IV76 773 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 C4orf19Q8IY42 314 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 ARHGAP20Q9P2F6 1191 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 NXF1Q9UBU9 619 aaKnown RBP10.64□□□□□ -0.71
TRAF1-202ENST00000540010 DBR1Q9UK59 544 aaKnown RBP10.64□□□□□ -0.71
TRAF1-202ENST00000540010 SYNJ2BP-COX16A0A087WUM0 186 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 A0A0G2JND7 137 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 GOLGA8MH3BSY2 632 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 PODXLO00592 558 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 CCNE2O96020 404 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 FGFR4P22455 802 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 BMT2Q1RMZ1 405 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 LRRC31Q6UY01 552 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 ERO1BQ86YB8 467 aa10.64□□□□□ -0.71
TRAF1-202ENST00000540010 ZNF473Q8WTR7 871 aaKnown RBP10.64□□□□□ -0.71
TRAF1-202ENST00000540010 ARL8AQ96BM9 186 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms