RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 LBX1P52954 281 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 KRT83P78385 493 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 GCNT1Q02742 428 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 TMEM132DQ14C87 1099 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 RUFY4Q6ZNE9 571 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 CBWD2Q8IUF1 395 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 LRRC8AQ8IWT6 810 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 SEPT8Q92599 483 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 SAAL1Q96ER3 474 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 CALR3Q96L12 384 aaKnown RBP12.74□□□□□ -0.37
VTN-202ENST00000539746 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 RPS6KC1Q96S38 1066 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 DEF6Q9H4E7 631 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 RAB20Q9NX57 234 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 KANSL3Q9P2N6 904 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 GIT1Q9Y2X7 761 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 KIF2AO00139 706 aaPredicted RBP12.73□□□□□ -0.37
VTN-202ENST00000539746 EOMESO95936 686 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 CYP3A5P20815 502 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 CASP4P49662 377 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 CDK7P50613 346 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 RBP5P82980 135 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
VTN-202ENST00000539746 ARID5BQ14865 1188 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 SPA17Q15506 151 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 AMHR2Q16671 573 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 ZACNQ401N2 412 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 C10orf76Q5T2E6 689 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 SLC39A4Q6P5W5 647 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 TRIM65Q6PJ69 517 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 LRRC8DQ7L1W4 858 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 EEF2KMTQ96G04 330 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 DNAJC7Q99615 494 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
VTN-202ENST00000539746 STK33Q9BYT3 514 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
VTN-202ENST00000539746 C11orf49Q9H6J7 331 aa12.73□□□□□ -0.37
VTN-202ENST00000539746 FAM207AQ9NSI2 230 aaPredicted RBP12.73□□□□□ -0.37
VTN-202ENST00000539746 UBQLN1Q9UMX0 589 aaKnown RBP12.73□□□□□ -0.37
VTN-202ENST00000539746 SIP14410 1827 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 TEX33O43247 280 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 ZNF623O75123 536 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 CKBP12277 381 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 SKILP12757 684 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 ITGA4P13612 1032 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 UCHL3P15374 230 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
VTN-202ENST00000539746 ACOT2P49753 483 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 NFX1Q12986 1120 aaKnown RBP12.72□□□□□ -0.37
VTN-202ENST00000539746 FBXO47Q5MNV8 452 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 KLHDC7AQ5VTJ3 777 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 CCDC42Q96M95 316 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 UROC1Q96N76 676 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 ABHD10Q9NUJ1 306 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 INTS13Q9NVM9 706 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
VTN-202ENST00000539746 SSU72P8A0A1W2PR75 194 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 GOLGA8JA6NMD2 632 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 LRRIQ3A6PVS8 624 aaPredicted RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 NPTXRO95502 500 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 SERPING1P05155 500 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 ADRB2P07550 413 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 PON1P27169 355 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 CASP14P31944 242 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 GCLMP48507 274 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 TFAMQ00059 246 aaKnown RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 MGAT3Q09327 533 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 TMEM62Q0P6H9 643 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 NCOA4Q13772 614 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 ASIC2Q16515 512 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 SLC24A5Q71RS6 500 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 RPUSD2Q8IZ73 545 aaKnown RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 LRRC52Q8N7C0 313 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 FAM212AQ96EL1 285 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 IFIH1Q9BYX4 1025 aaKnown RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 TSGA10Q9BZW7 698 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 ELAC1Q9H777 363 aaKnown RBP12.71□□□□□ -0.37
VTN-202ENST00000539746 MINDY3Q9H8M7 445 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 STK39Q9UEW8 545 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 ZKSCAN5Q9Y2L8 839 aa12.71□□□□□ -0.37
VTN-202ENST00000539746 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms