RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 FNIP2Q9P278 1114 aa18.41■□□□□ 0.54
DDB1-215ENST00000539712 MYO10Q9HD67 2058 aa18.41■□□□□ 0.54
DDB1-215ENST00000539712 ZNF318Q5VUA4 2279 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 C1RP00736 705 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 SPATA31D3P0C874 917 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 RPL17P18621 184 aaKnown RBP18.4■□□□□ 0.54
DDB1-215ENST00000539712 PLCG1P19174 1290 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 PDCP20941 246 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 UBA7P41226 1012 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 SOX4Q06945 474 aaPredicted RBP18.4■□□□□ 0.54
DDB1-215ENST00000539712 KARSQ15046 597 aaKnown RBP18.4■□□□□ 0.54
DDB1-215ENST00000539712 ZNF568Q3ZCX4 644 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 PRSS55Q6UWB4 352 aaPredicted RBP18.4■□□□□ 0.54
DDB1-215ENST00000539712 TRIM67Q6ZTA4 783 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 SPATA31D4Q6ZUB0 917 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 ZBTB33Q86T24 672 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 CMASQ8NFW8 434 aaPredicted RBP18.4■□□□□ 0.54
DDB1-215ENST00000539712 LNX1Q8TBB1 728 aaPredicted RBP18.4■□□□□ 0.54
DDB1-215ENST00000539712 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 REEP2Q9BRK0 252 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 HAPLN2Q9GZV7 340 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 MAN1C1Q9NR34 630 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 MTMR6Q9Y217 621 aa18.4■□□□□ 0.54
DDB1-215ENST00000539712 SF3B1O75533 1304 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDB1-215ENST00000539712 ZDBF2Q9HCK1 2354 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 TGM5O43548 720 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 GLUD1P00367 558 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 MYBP10242 640 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 MCF2P10911 925 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 CLCNKBP51801 687 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 ZNF131P52739 623 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 NCKAP1LP55160 1127 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 OSTNP61366 133 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 PTPN21Q16825 1174 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 UPP1Q16831 310 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 FAM171A1Q5VUB5 890 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 MPZL3Q6UWV2 235 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 C15orf39Q6ZRI6 1047 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 PALB2Q86YC2 1186 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 C3orf58Q8NDZ4 430 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 ZNF707Q96C28 371 aaPredicted RBP18.39■□□□□ 0.53
DDB1-215ENST00000539712 EPSTI1Q96J88 318 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 CLSTN3Q9BQT9 956 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 CCSER1Q9C0I3 900 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 GOLGA2P5Q9HBQ8 144 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.39■□□□□ 0.53
DDB1-215ENST00000539712 FBXO2Q9UK22 296 aaPredicted RBP18.39■□□□□ 0.53
DDB1-215ENST00000539712 NR2E1Q9Y466 385 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 ARIH1Q9Y4X5 557 aaPredicted RBP18.39■□□□□ 0.53
DDB1-215ENST00000539712 DENND4AQ7Z401 1863 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 C2orf16Q68DN1 1984 aa18.39■□□□□ 0.53
DDB1-215ENST00000539712 TMEM189-UBE2V1I3L0A0 370 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 ADAM12O43184 909 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 TOM1L1O75674 476 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 RFPL2O75678 378 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 KCNE1P15382 129 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 MCM6Q14566 821 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 SPECC1Q5M775 1068 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 DCLRE1AQ6PJP8 1040 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 APBB1IPQ7Z5R6 666 aaPredicted RBP18.38■□□□□ 0.53
DDB1-215ENST00000539712 BMP8AQ7Z5Y6 402 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 GPBP1Q86WP2 473 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 ZDHHC14Q8IZN3 488 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 HDAC7Q8WUI4 952 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 PIK3R5Q8WYR1 880 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 RAD54LQ92698 747 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 ASIC4Q96FT7 647 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 CALML4Q96GE6 196 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 SNX27Q96L92 541 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 FIZ1Q96SL8 496 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 TTPALQ9BTX7 342 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 CCDC94Q9BW85 323 aaPredicted RBP18.38■□□□□ 0.53
DDB1-215ENST00000539712 RHOBTB2Q9BYZ6 727 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 KCNG1Q9UIX4 513 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 USTQ9Y2C2 406 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 VWA8A3KMH1 1905 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 MYH11P35749 1972 aa18.38■□□□□ 0.53
DDB1-215ENST00000539712 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 TMEM221A6NGB7 291 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 K7ELQ4 463 aaPredicted RBP18.37■□□□□ 0.53
DDB1-215ENST00000539712 M0R296 226 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 FGFR3P22607 806 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 MARCKSP29966 332 aaPredicted RBP18.37■□□□□ 0.53
DDB1-215ENST00000539712 SMTNP53814 917 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 DHX8Q14562 1220 aaKnown RBP18.37■□□□□ 0.53
DDB1-215ENST00000539712 SLC10A6Q3KNW5 377 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 SEZ6Q53EL9 994 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 GLYCTKQ8IVS8 523 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 TCHPQ9BT92 498 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 CNTN3Q9P232 1028 aa18.37■□□□□ 0.53
DDB1-215ENST00000539712 MTCL1Q9Y4B5 1905 aaKnown RBP18.37■□□□□ 0.53
DDB1-215ENST00000539712 N4BP1O75113 896 aaKnown RBP18.36■□□□□ 0.53
DDB1-215ENST00000539712 B3GAT3O94766 335 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 DDIT3P35638 169 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 MCL1Q07820 350 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms