RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 GHRP10912 638 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TNFSF9P41273 254 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 MXI1P50539 228 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 DLG4P78352 724 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 CETN1Q12798 172 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 SYCP1Q15431 976 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TRIM60Q495X7 471 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 FIGNQ5HY92 759 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 GBP6Q6ZN66 633 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
LEMD3-202ENST00000539442 WDR49Q8IV35 697 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 CD302Q8IX05 232 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 CEP120Q8N960 986 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 CCDC127Q96BQ5 260 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 PAWRQ96IZ0 340 aaKnown RBP11.55□□□□□ -0.56
LEMD3-202ENST00000539442 CGRRF1Q99675 332 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TRAIPQ9BWF2 469 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TRIM6Q9C030 488 aaPredicted RBP11.55□□□□□ -0.56
LEMD3-202ENST00000539442 ASB7Q9H672 318 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 AGO3Q9H9G7 860 aaKnown RBP11.55□□□□□ -0.56
LEMD3-202ENST00000539442 PLEKHA5Q9HAU0 1116 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TMEM8AQ9HCN3 771 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 PADI3Q9ULW8 664 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 SIK3Q9Y2K2 1263 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TPM1P09493 284 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 DLATP10515 647 aaKnown RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 ZSCAN20P17040 1043 aaPredicted RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 CD52P31358 61 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 RAB27AP51159 221 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 GSDMDP57764 484 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 MYL7Q01449 175 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TLE2Q04725 743 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 PPP3CAQ08209 521 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 NFX1Q12986 1120 aaKnown RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TBX2Q13207 712 aaPredicted RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 ENOX2Q16206 610 aaKnown RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 EXOC3L4Q17RC7 722 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 CBWD6Q4V339 395 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 SEZ6Q53EL9 994 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 CBWD3Q5JTY5 395 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 CBWD5Q5RIA9 395 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 UBXN11Q5T124 520 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 KRT39Q6A163 491 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TWF2Q6IBS0 349 aaKnown RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 NT5DC4Q86YG4 428 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 HACE1Q8IYU2 909 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 ACAP3Q96P50 834 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TSPAN18Q96SJ8 248 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 EIF2AQ9BY44 585 aaKnown RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 HIPK3Q9H422 1215 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 PDE11AQ9HCR9 933 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 PLCB1Q9NQ66 1216 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TOPORSQ9NS56 1045 aaPredicted RBP11.54□□□□□ -0.56
LEMD3-202ENST00000539442 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 DAAM1Q9Y4D1 1078 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 CENPFP49454 3210 aa11.54□□□□□ -0.56
LEMD3-202ENST00000539442 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
LEMD3-202ENST00000539442 CXCL8P10145 99 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 SKIP12755 728 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 TNNI1P19237 187 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 TRIM21P19474 475 aaKnown RBP11.53□□□□□ -0.56
LEMD3-202ENST00000539442 GCLMP48507 274 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 YARSP54577 528 aaKnown RBP11.53□□□□□ -0.56
LEMD3-202ENST00000539442 OSTNP61366 133 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 DSC3Q14574 896 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 MBTPS1Q14703 1052 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 PPFIBP1Q86W92 1011 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
LEMD3-202ENST00000539442 FTHL17Q9BXU8 183 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
LEMD3-202ENST00000539442 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 MMRN2Q9H8L6 949 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 TBX21Q9UL17 535 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 COQ4Q9Y3A0 265 aa11.53□□□□□ -0.56
LEMD3-202ENST00000539442 A0A1W2PQJ5 194 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 GYPCP04921 128 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 CLTBP09497 229 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 RFX1P22670 979 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 WNT7BP56706 349 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 DUOXA2Q1HG44 320 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 ZACNQ401N2 412 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 EPC2Q52LR7 807 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 SV2AQ7L0J3 742 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 CNGA4Q8IV77 575 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 TMEM192Q8IY95 271 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
LEMD3-202ENST00000539442 NEK11Q8NG66 645 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms