RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SIGLEC14Q08ET2 396 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 STRN3Q13033 797 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 ARSHQ5FYA8 562 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 KREMEN2Q8NCW0 462 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 TMEM161BQ8NDZ6 487 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 LRRC15Q8TF66 581 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 SPIRE2Q8WWL2 714 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 PBXIP1Q96AQ6 731 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 CALML4Q96GE6 196 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 ZBTB45Q96K62 511 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 MFSD14AQ96MC6 490 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 NTPCRQ9BSD7 190 aaKnown RBP20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 TTPALQ9BTX7 342 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 GOLGA2P5Q9HBQ8 144 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 FNIP2Q9P278 1114 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 LIMD1Q9UGP4 676 aa20.91■□□□□ 0.94
TNFRSF1A-212ENST00000539372 SMIM28A0A1B0GU29 152 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 CCDC195A0A1B0GUA6 201 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 ABLIM1O14639 778 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 ASGR2P07307 311 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 MAPTP10636 758 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 PROZP22891 400 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 CLCNKBP51801 687 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 SMTNP53814 917 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 ELMSAN1Q6PJG2 1045 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 MPZL3Q6UWV2 235 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 C15orf39Q6ZRI6 1047 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 CCDC149Q6ZUS6 474 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 GPBP1Q86WP2 473 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 CMASQ8NFW8 434 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 RASSF8Q8NHQ8 419 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 FOXD4L1Q9NU39 408 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 KCND2Q9NZV8 630 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 ANKFY1Q9P2R3 1169 aa20.9■□□□□ 0.94
TNFRSF1A-212ENST00000539372 B3GAT3O94766 335 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MCF2P10911 925 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PLCG1P19174 1290 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PDCP20941 246 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 LONP1P36776 959 aaKnown RBP20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CREMQ03060 361 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 KARSQ15046 597 aaKnown RBP20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 GPR65Q8IYL9 337 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZDHHC14Q8IZN3 488 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ACAP3Q96P50 834 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SMOC2Q9H3U7 446 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TOPORSQ9NS56 1045 aaPredicted RBP20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 DAXXQ9UER7 740 aaPredicted RBP20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 DPP7Q9UHL4 492 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 USTQ9Y2C2 406 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ARIH1Q9Y4X5 557 aaPredicted RBP20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CLIC4Q9Y696 253 aa20.89■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SLC26A4O43511 780 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SOX4Q06945 474 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ELAVL2Q12926 359 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MCM6Q14566 821 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PSMD5Q16401 504 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SEZ6Q53EL9 994 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 DCLRE1AQ6PJP8 1040 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ALKAL1Q6UXT8 129 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 LNX1Q8TBB1 728 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PIK3R5Q8WYR1 880 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ASIC4Q96FT7 647 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SNX27Q96L92 541 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZMAT2Q96NC0 199 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 REEP2Q9BRK0 252 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 BLOC1S4Q9NUP1 217 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 KCNG1Q9UIX4 513 aa20.88■□□□□ 0.93
TNFRSF1A-212ENST00000539372 C2orf16Q68DN1 1984 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 I3L4J1 428 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 BRD1O95696 1058 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SYT1P21579 422 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MARCKSP29966 332 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 RESTQ13127 1097 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MTMR3Q13615 1198 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 UPP1Q16831 310 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 XKR4Q5GH76 650 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SPECC1Q5M775 1068 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 FAM173BQ6P4H8 233 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 LILRA6Q6PI73 481 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CD300LGQ6UXG3 332 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 OTOP3Q7RTS5 596 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 BMP8AQ7Z5Y6 402 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PLCD3Q8N3E9 789 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 C3orf58Q8NDZ4 430 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 HDAC7Q8WUI4 952 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SMG7Q92540 1137 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 RAD54LQ92698 747 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZNF707Q96C28 371 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ACSF2Q96CM8 615 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 UROC1Q96N76 676 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CLSTN3Q9BQT9 956 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PLEKHA4Q9H4M7 779 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 LARSQ9P2J5 1176 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SORCS3Q9UPU3 1222 aa20.87■□□□□ 0.93
TNFRSF1A-212ENST00000539372 DENND4AQ7Z401 1863 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MEFVO15553 781 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ADAM12O43184 909 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TOM1L1O75674 476 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MATR3P43243 847 aaKnown RBP eCLIP20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 NOLC1Q14978 699 aaKnown RBP eCLIP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms