RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TMEM161AQ9NX61 479 aa25.53■■□□□ 1.68
TMEM260-202ENST00000538838 FNDC1Q4ZHG4 1894 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 EFCAB14O75071 495 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 ATP1A3P13637 1013 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 MLH1P40692 756 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 MARSP56192 900 aaKnown RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 BFSP1Q12934 665 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 PSMD6Q15008 389 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 TCP11X2Q5H9J9 407 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 INTS8Q75QN2 995 aaKnown RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 FRMD5Q7Z6J6 570 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 CCDC127Q96BQ5 260 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 TOPORSQ9NS56 1045 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 TTC26A0AVF1 554 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 ZBBXA8MT70 800 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 LACTBL1A8MY62 500 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 EOMESO95936 686 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 FGFR1P11362 822 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 KRT13P13646 458 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 TPM4P67936 248 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 DLG4P78352 724 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 PPP2R3AQ06190 1150 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 DCAF17Q5H9S7 520 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 ZFP42Q96MM3 310 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 ELAC1Q9H777 363 aaKnown RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 RSAD1Q9HA92 442 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 METTL14Q9HCE5 456 aaKnown RBP25.52■■□□□ 1.68
TMEM260-202ENST00000538838 RNF19AQ9NV58 838 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 LRFN2Q9ULH4 789 aa25.52■■□□□ 1.68
TMEM260-202ENST00000538838 AMHP03971 560 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 TRIM49P0CI25 452 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 TRIM49CP0CI26 452 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 EEF1GP26641 437 aaKnown RBP25.51■■□□□ 1.67
TMEM260-202ENST00000538838 MTIF2P46199 727 aaKnown RBP25.51■■□□□ 1.67
TMEM260-202ENST00000538838 VAMP7P51809 220 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 SPAG1Q07617 926 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 NPAS4Q8IUM7 802 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 CRIPAKQ8N1N5 446 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 FAM84AQ96KN4 292 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 GIT1Q9Y2X7 761 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 PCDHB7Q9Y5E2 793 aa25.51■■□□□ 1.67
TMEM260-202ENST00000538838 PTPRJQ12913 1337 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 COL4A6Q14031 1691 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 IL18RAPO95256 599 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 DLATP10515 647 aaKnown RBP25.5■■□□□ 1.67
TMEM260-202ENST00000538838 KCNJ6P48051 423 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 AFF1P51825 1210 aaKnown RBP25.5■■□□□ 1.67
TMEM260-202ENST00000538838 POU5F1Q01860 360 aaKnown RBP25.5■■□□□ 1.67
TMEM260-202ENST00000538838 GLRA4Q5JXX5 417 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 CLLU1OSQ5K130 101 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 TMCO2Q7Z6W1 182 aaPredicted RBP25.5■■□□□ 1.67
TMEM260-202ENST00000538838 TRIM59Q8IWR1 403 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 PARD3BQ8TEW8 1205 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 GAD1Q99259 594 aa25.5■■□□□ 1.67
TMEM260-202ENST00000538838 CXXC1Q9P0U4 656 aaPredicted RBP25.5■■□□□ 1.67
TMEM260-202ENST00000538838 LRRIQ3A6PVS8 624 aaPredicted RBP25.49■■□□□ 1.67
TMEM260-202ENST00000538838 H0YGN5 161 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 UPP2O95045 317 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 CDK11BP21127 795 aaKnown RBP25.49■■□□□ 1.67
TMEM260-202ENST00000538838 C1orf220Q5T0J3 134 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 TCERG1LQ5VWI1 586 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 LMBRD2Q68DH5 695 aaPredicted RBP25.49■■□□□ 1.67
TMEM260-202ENST00000538838 ALKAL1Q6UXT8 129 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 EFCAB13Q8IY85 973 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 HELQQ8TDG4 1101 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 TMC2Q8TDI7 906 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 POP1Q99575 1024 aaKnown RBP25.49■■□□□ 1.67
TMEM260-202ENST00000538838 PLEKHA5Q9HAU0 1116 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 TAB2Q9NYJ8 693 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 CNTN3Q9P232 1028 aa25.49■■□□□ 1.67
TMEM260-202ENST00000538838 ARL5CA6NH57 179 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 NFICP08651 508 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 KRT31Q15323 416 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 JADE1Q6IE81 842 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 HERVK_113Q902F9 699 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 SLC35C1Q96A29 364 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 ZMAT2Q96NC0 199 aaKnown RBP25.48■■□□□ 1.67
TMEM260-202ENST00000538838 FNBP1Q96RU3 617 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 CGRRF1Q99675 332 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 ASB7Q9H672 318 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 UBN1Q9NPG3 1134 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 INPP5FQ9Y2H2 1132 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 PTGESO14684 152 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 GATMP50440 423 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 XKR4Q5GH76 650 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 GSTCDQ8NEC7 633 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 RPS6KC1Q96S38 1066 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 TUBGCP2Q9BSJ2 902 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 LIMA1Q9UHB6 759 aaKnown RBP25.48■■□□□ 1.67
TMEM260-202ENST00000538838 PLAGL2Q9UPG8 496 aa25.48■■□□□ 1.67
TMEM260-202ENST00000538838 OFD1O75665 1012 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 SCNN1GP51170 649 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 SURF1Q15526 300 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 C9orf50Q5SZB4 431 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 GLB1LQ6UWU2 654 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 CD302Q8IX05 232 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 TOP1MTQ969P6 601 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 KIF12Q96FN5 646 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 MMRN2Q9H8L6 949 aa25.47■■□□□ 1.67
TMEM260-202ENST00000538838 RNF216Q9NWF9 866 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms