RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SPDYE16A6NNV3 312 aaPredicted RBP26.71■■□□□ 1.87
RAB40C-204ENST00000538492 RTP1P59025 263 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 XKR3Q5GH77 459 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 ACAD10Q6JQN1 1059 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 KLRG1Q96E93 195 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 LRRC4CQ9HCJ2 640 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 C1orf112Q9NSG2 853 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 TNNI1P19237 187 aa26.7■■□□□ 1.87
RAB40C-204ENST00000538492 ATP4AP20648 1035 aa26.7■■□□□ 1.87
RAB40C-204ENST00000538492 CNTN2Q02246 1040 aa26.7■■□□□ 1.87
RAB40C-204ENST00000538492 PHLDB2Q86SQ0 1253 aa26.7■■□□□ 1.87
RAB40C-204ENST00000538492 ZDHHC18Q9NUE0 388 aa26.7■■□□□ 1.87
RAB40C-204ENST00000538492 FAM187AA6NFU0 413 aa26.7■■□□□ 1.86
RAB40C-204ENST00000538492 LSP1P33241 339 aa26.7■■□□□ 1.86
RAB40C-204ENST00000538492 NLRP11P59045 1033 aaKnown RBP26.7■■□□□ 1.86
RAB40C-204ENST00000538492 KIAA0391O15091 583 aaKnown RBP26.69■■□□□ 1.86
RAB40C-204ENST00000538492 CTNNA2P26232 953 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 CHRNA3P32297 505 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 PTGIRP43119 386 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 GCNT1Q02742 428 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 CCDC137Q6PK04 289 aaKnown RBP26.69■■□□□ 1.86
RAB40C-204ENST00000538492 SEPT14Q6ZU15 432 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 FNBP1Q96RU3 617 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 GGA3Q9NZ52 723 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 UVRAGQ9P2Y5 699 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 A6NNZ2 444 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 ATP2A1O14983 1001 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 EXTL3O43909 919 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 CLEC16AQ2KHT3 1053 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 TUBB8Q3ZCM7 444 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 C2CD6Q53TS8 623 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 EMC10Q5UCC4 262 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 SPOPLQ6IQ16 392 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 FBXO25Q8TCJ0 367 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 ZBTB45Q96K62 511 aaPredicted RBP26.69■■□□□ 1.86
RAB40C-204ENST00000538492 RASAL2Q9UJF2 1139 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 LCTP09848 1927 aa26.69■■□□□ 1.86
RAB40C-204ENST00000538492 STRN3Q13033 797 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 APOBEC3FQ8IUX4 373 aaKnown RBP26.68■■□□□ 1.86
RAB40C-204ENST00000538492 ASAP3Q8TDY4 903 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 MORC4Q8TE76 937 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 ZNF302Q9NR11 478 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 FEZ2Q9UHY8 353 aaPredicted RBP26.68■■□□□ 1.86
RAB40C-204ENST00000538492 PTPN22Q9Y2R2 807 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 PCDHA3Q9Y5H8 950 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 LRRIQ4A6NIV6 560 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 NDUFAB1O14561 156 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 PPFIA2O75334 1257 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 HSPA6P17066 643 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 C15orf39Q6ZRI6 1047 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 CPA5Q8WXQ8 436 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 HOXC10Q9NYD6 342 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 PTPRJQ12913 1337 aa26.68■■□□□ 1.86
RAB40C-204ENST00000538492 EBAG9O00559 213 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 MDH1P40925 334 aaKnown RBP26.67■■□□□ 1.86
RAB40C-204ENST00000538492 BIRC3Q13489 604 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 STXBP2Q15833 593 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 RUFY4Q6ZNE9 571 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 SLC13A5Q86YT5 568 aaPredicted RBP26.67■■□□□ 1.86
RAB40C-204ENST00000538492 TRIM7Q9C029 511 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 HAPLN2Q9GZV7 340 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.67■■□□□ 1.861e-6■■■□□ 16.2
RAB40C-204ENST00000538492 ANAPC7Q9UJX3 599 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 AGO2Q9UKV8 859 aaKnown RBP26.67■■□□□ 1.86
RAB40C-204ENST00000538492 STAM2O75886 525 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 KRT71Q3SY84 523 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 TDRD10Q5VZ19 366 aaKnown RBP26.67■■□□□ 1.86
RAB40C-204ENST00000538492 ZDHHC24Q6UX98 284 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 ANKRD35Q8N283 1001 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 TXLNGYQ9BZA5 131 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 PCYOX1Q9UHG3 505 aa26.67■■□□□ 1.86
RAB40C-204ENST00000538492 ERLIN2O94905 339 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 HLA-DRAP01903 254 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 RPL21P46778 160 aaKnown RBP26.66■■□□□ 1.86
RAB40C-204ENST00000538492 IFFO1Q0D2I5 559 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 ODF2Q5BJF6 829 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 LLGL2Q6P1M3 1020 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 PSPC1Q8WXF1 523 aaKnown RBP26.66■■□□□ 1.86
RAB40C-204ENST00000538492 ANKFY1Q9P2R3 1169 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 AFG3L2Q9Y4W6 797 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 DCDC2CA8MYV0 355 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 H0YCG3 227 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 RARAP10276 462 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 PIK3CAP42336 1068 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 KCNJ1P48048 391 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 RWDD2BP57060 319 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 WDR44Q5JSH3 913 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 ZBTB41Q5SVQ8 909 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 ENOSF1Q7L5Y1 443 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 CCDC105Q8IYK2 499 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 GRHL1Q9NZI5 618 aa26.66■■□□□ 1.86
RAB40C-204ENST00000538492 NOVA2Q9UNW9 492 aaKnown RBP26.66■■□□□ 1.86
RAB40C-204ENST00000538492 OATP04181 439 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 GLRA2P23416 452 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 MKRN4PQ13434 485 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-204ENST00000538492 MAFBQ9Y5Q3 323 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-204ENST00000538492 ZC3H11AO75152 810 aaKnown RBP eCLIP26.65■■□□□ 1.86
RAB40C-204ENST00000538492 GGPS1O95749 300 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 UNGP13051 313 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-204ENST00000538492 MAPK4P31152 587 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms