RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CD4P01730 458 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 EDN1P05305 212 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 RAG1P15918 1043 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TNFSF9P41273 254 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 GRM5P41594 1212 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 GCLMP48507 274 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 RAB27AP51159 221 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 AP3M2P53677 418 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MGAT3Q09327 533 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LPIN1Q14693 890 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PSMD6Q15008 389 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SYCP1Q15431 976 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 AMHR2Q16671 573 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SPECC1LQ69YQ0 1117 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 DEFB128Q7Z7B8 93 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CD302Q8IX05 232 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 RPS6KC1Q96S38 1066 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ADAM2Q99965 735 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CRACR2AQ9BSW2 395 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FTHL17Q9BXU8 183 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IFIH1Q9BYX4 1025 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PDE11AQ9HCR9 933 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SNTG2Q9NY99 539 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SIP14410 1827 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 AP5Z1O43299 807 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ADRB2P07550 413 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 KRT19P08727 400 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CXCL8P10145 99 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PROZP22891 400 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CDC25BP30305 580 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 GTF2H1P32780 548 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CYP2C18P33260 490 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FMO5P49326 533 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MXI1P50539 228 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM14Q14142 442 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 EXOC3L4Q17RC7 722 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 DUOXA2Q1HG44 320 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LRRC26Q2I0M4 334 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 KRT39Q6A163 491 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ZSWIM2Q8NEG5 633 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FBXL18Q96ME1 805 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 HTATIP2Q9BUP3 242 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LSM14BQ9BX40 385 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 EIF2AQ9BY44 585 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IMPG2Q9BZV3 1241 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 AGO3Q9H9G7 860 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PTPRHQ9HD43 1115 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ZNHIT6Q9NWK9 470 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IMPACTQ9P2X3 320 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CPSF3Q9UKF6 684 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PCDHB2Q9Y5E7 798 aa11.54□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LRRIQ3A6PVS8 624 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LACTBL1A8MY62 500 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 COL6A1P12109 1028 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 AKAP5P24588 427 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 HOXA11P31270 313 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PIK3CAP42336 1068 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 GSDMDP57764 484 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 DLG4P78352 724 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FAAP100Q0VG06 881 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMEM132DQ14C87 1099 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ZBTB41Q5SVQ8 909 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LMBRD2Q68DH5 695 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 VSTM4Q8IW00 320 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 RPUSD2Q8IZ73 545 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CEP120Q8N960 986 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 DPF3Q92784 378 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 APBB2Q92870 758 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SLC35C1Q96A29 364 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IQCDQ96DY2 449 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SCLYQ96I15 445 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 HAPLN2Q9GZV7 340 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ASB7Q9H672 318 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PLEKHA5Q9HAU0 1116 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMEM8AQ9HCN3 771 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 C1orf112Q9NSG2 853 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FAM105AQ9NUU6 356 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 KLK14Q9P0G3 267 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
TNFRSF1A-211ENST00000538363 A0A1W2PQC6 194 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 AKR1B15C9JRZ8 316 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 P4HA2O15460 535 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ACTN1P12814 892 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RFC2P35250 354 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 POU5F1Q01860 360 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ENPEPQ07075 957 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 LRMPQ12912 555 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms