RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 MEI1Q5TIA1 1274 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 HHIPL2Q6UWX4 724 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 MFN1Q8IWA4 741 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 DDIASQ8IXT1 998 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 C3orf70A6NLC5 250 aaPredicted RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 HAUS5O94927 633 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 SCP2P22307 547 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 CYP2C19P33261 490 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 EIF3EP60228 445 aaKnown RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 R3HDM1Q15032 1099 aaKnown RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 PDXDC1Q6P996 788 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 PGBD3Q8N328 593 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 OTUB1Q96FW1 271 aaPredicted RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 GGA3Q9NZ52 723 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 PIK3R2O00459 728 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 PRRG1O14668 218 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 UPP2O95045 317 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 RFC5P40937 340 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 WASHC5Q12768 1159 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 SF3B3Q15393 1217 aaKnown RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 GLB1LQ6UWU2 654 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 ZFATQ9P243 1243 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 FRMD3A2A2Y4 597 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 HIST1H2AGP0C0S8 130 aaPredicted RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 OCM2P0CE71 109 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 OCMP0CE72 109 aaPredicted RBP17.75■□□□□ 0.43
SCARB1-205ENST00000538291 HIST1H2ADP20671 130 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 ATICP31939 592 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 ANO4Q32M45 955 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 HIST1H2AJQ99878 128 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 H2AFJQ9BTM1 129 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 SYCE1LA8MT33 242 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 TBX3O15119 743 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 PSMD3O43242 534 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ITGA4P13612 1032 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 BRAFP15056 766 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SYTL3Q4VX76 610 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ZC3H12BQ5HYM0 836 aaKnown RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 FAM151AQ8WW52 585 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SLC13A1Q9BZW2 595 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SMYD3Q9H7B4 428 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 KIF17Q9P2E2 1029 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SFMBT1Q9UHJ3 866 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 NCK2O43639 380 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 MAP4P27816 1152 aaKnown RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 VPS72Q15906 364 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SCFD1Q8WVM8 642 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 STX18Q9P2W9 335 aaKnown RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SSTR3P32745 418 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SCARF1Q14162 830 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SGSM1Q2NKQ1 1148 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 SBK1Q52WX2 424 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 MTHFD1LQ6UB35 978 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 DCP1BQ8IZD4 617 aaKnown RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ST13P4Q8IZP2 240 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 C1orf54Q8WWF1 131 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ZNF512Q96ME7 567 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 CETPP11597 493 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ARID5BQ14865 1188 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 STKLD1Q8NE28 680 aa17.74■□□□□ 0.43
SCARB1-205ENST00000538291 EML4Q9HC35 981 aaKnown RBP17.74■□□□□ 0.43
SCARB1-205ENST00000538291 ABCC3O15438 1527 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 ACOT2P49753 483 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 ARSEP51690 589 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 ARFIP2P53365 341 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 MAGOHP61326 146 aaKnown RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 NAF1Q96HR8 494 aaKnown RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 FOPNLQ96NB1 174 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 ALDH8A1Q9H2A2 487 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 ADA2Q9NZK5 511 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 KCND2Q9NZV8 630 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 SNX5Q9Y5X3 404 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 PFDN1O60925 122 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 MCF2P10911 925 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 NDE1Q9NXR1 346 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 RNF103-CHMP3A0A140T963 221 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 PDGFRAP16234 1089 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 DHX34Q14147 1143 aaKnown RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 OR9Q1Q8NGQ5 310 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 ARL4DP49703 201 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 EMC2Q15006 297 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 MAPRE2Q15555 327 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 C1orf146Q5VVC0 180 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 CDC42EP5Q6NZY7 148 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 PATL1Q86TB9 770 aaKnown RBP17.73■□□□□ 0.43
SCARB1-205ENST00000538291 CCSER1Q9C0I3 900 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 SYNDIG1Q9H7V2 258 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 CCL15-CCL14A0A0B4J2E2 113 aa17.73■□□□□ 0.43
SCARB1-205ENST00000538291 PDCLQ13371 301 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms