RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SLFN11Q7Z7L1 901 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 OR5B17Q8NGF7 314 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 SCFD2Q8WU76 684 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 RIN2Q8WYP3 895 aaPredicted RBP18.79■□□□□ 0.6
SNX17-210ENST00000537606 FAM212AQ96EL1 285 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 PPP1R16BQ96T49 567 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 SUCLA2Q9P2R7 463 aaPredicted RBP18.79■□□□□ 0.6
SNX17-210ENST00000537606 HPCAL4Q9UM19 191 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 SCN4AP35499 1836 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 ESYT3A0FGR9 886 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 PIK3CAP42336 1068 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 FMO1Q01740 532 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 ZNF792Q3KQV3 632 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 ZACNQ401N2 412 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 NT5DC3Q86UY8 548 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 LMBR1Q8WVP7 490 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 VTI1AQ96AJ9 217 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 KRT12Q99456 494 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 STIM2Q9P246 746 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 VNN1O95497 513 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 GLI1P08151 1106 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 ADCYAP1R1P41586 468 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 GTF2A2P52657 109 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 CCNA1P78396 465 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 EFCAB12Q6NXP0 572 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 SMARCAD1Q9H4L7 1026 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 C1orf112Q9NSG2 853 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 STXBP5LQ9Y2K9 1186 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 NCANO14594 1321 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 ADGRA2Q96PE1 1338 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 A0A0U1RQG5 324 aaPredicted RBP18.78■□□□□ 0.6
SNX17-210ENST00000537606 CSDE1O75534 798 aaKnown RBP18.78■□□□□ 0.6
SNX17-210ENST00000537606 CLDN10P78369 228 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 GPS2Q13227 327 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 SND1Q7KZF4 910 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNX17-210ENST00000537606 AENQ8WTP8 325 aaKnown RBP18.78■□□□□ 0.6
SNX17-210ENST00000537606 ISCUQ9H1K1 167 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 GBA2Q9HCG7 927 aaPredicted RBP18.78■□□□□ 0.6
SNX17-210ENST00000537606 CTTNBP2NLQ9P2B4 639 aa18.78■□□□□ 0.6
SNX17-210ENST00000537606 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.77■□□□□ 0.6
SNX17-210ENST00000537606 CELF2O95319 508 aaKnown RBP18.77■□□□□ 0.6
SNX17-210ENST00000537606 FAM193AP78312 1265 aa18.77■□□□□ 0.6
SNX17-210ENST00000537606 ARHGAP1Q07960 439 aa18.77■□□□□ 0.6
SNX17-210ENST00000537606 TRADDQ15628 312 aa18.77■□□□□ 0.6
SNX17-210ENST00000537606 ADAM21Q9UKJ8 722 aa18.77■□□□□ 0.6
SNX17-210ENST00000537606 ZC3H4Q9UPT8 1303 aaKnown RBP18.77■□□□□ 0.6
SNX17-210ENST00000537606 ATP8B3O60423 1300 aa18.77■□□□□ 0.59
SNX17-210ENST00000537606 CNTNAP2Q9UHC6 1331 aa18.77■□□□□ 0.59
SNX17-210ENST00000537606 IGKV6-21A0A0C4DH24 114 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 TMEM110-MUSTN1A8MSY1 372 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 B4GALT5O43286 388 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 PRKCBP05771 671 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 PDE6CP51160 858 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 OSTNP61366 133 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 WDR44Q5JSH3 913 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 KLHL7Q8IXQ5 586 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 TCP11Q8WWU5 503 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 PTPN18Q99952 460 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 AP1M1Q9BXS5 423 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 MRPL4Q9BYD3 311 aaKnown RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 CCDC113Q9H0I3 377 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 RNF14Q9UBS8 474 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 IVNS1ABPQ9Y6Y0 642 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 EVPLQ92817 2033 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 INO80B-WBP1J3KQ70 363 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 RTN2O75298 545 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 ZNF286BP0CG31 522 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 ZBTB48P10074 688 aaPredicted RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 SSTR3P32745 418 aaPredicted RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 MXD4Q14582 209 aaPredicted RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 MAPK6Q16659 721 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 MAMDC4Q6UXC1 1216 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 SYCE1Q8N0S2 351 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 AFG1LQ8WV93 481 aa18.76■□□□□ 0.59
SNX17-210ENST00000537606 ACO2Q99798 780 aaKnown RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 INO80BQ9C086 356 aaPredicted RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 APOBEC3GQ9HC16 384 aaKnown RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 DIS3Q9Y2L1 958 aaKnown RBP18.76■□□□□ 0.59
SNX17-210ENST00000537606 GRIN3BO60391 1043 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 EFNA5P52803 228 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 GPC5P78333 572 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 GCNT1Q02742 428 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 DPP9Q86TI2 863 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 ZBTB8OSQ8IWT0 167 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 MSL3Q8N5Y2 521 aaKnown RBP18.75■□□□□ 0.59
SNX17-210ENST00000537606 DDX1Q92499 740 aaKnown RBP18.75■□□□□ 0.59
SNX17-210ENST00000537606 KCNN1Q92952 543 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 MINDY3Q9H8M7 445 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 UMODL1Q5DID0 1318 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 KIAA0391O15091 583 aaKnown RBP18.75■□□□□ 0.59
SNX17-210ENST00000537606 HBP1O60381 514 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 TOM1L1O75674 476 aa18.75■□□□□ 0.59
SNX17-210ENST00000537606 HEXIM1O94992 359 aaKnown RBP18.75■□□□□ 0.59
SNX17-210ENST00000537606 SYF2O95926 243 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms