RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 CROCCP2Q86T23 111 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 CCDC25Q86WR0 208 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 ATXN2LQ8WWM7 1075 aaKnown RBP15.34■□□□□ 0.05
USP44-203ENST00000537435 LPAR1Q92633 364 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 FBXL18Q96ME1 805 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 PI4K2AQ9BTU6 479 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 LRRC19Q9H756 370 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 ACTR5Q9H9F9 607 aaPredicted RBP15.34■□□□□ 0.05
USP44-203ENST00000537435 PXMP2Q9NR77 195 aa15.34■□□□□ 0.05
USP44-203ENST00000537435 MAP3K20Q9NYL2 800 aaKnown RBP15.34■□□□□ 0.05
USP44-203ENST00000537435 CALCOCO2Q13137 446 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 CLEC16AQ2KHT3 1053 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 C1orf54Q8WWF1 131 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 ZNF317Q96PQ6 595 aaPredicted RBP15.33■□□□□ 0.04
USP44-203ENST00000537435 TMEM109Q9BVC6 243 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 ANAPC7Q9UJX3 599 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 RASGRF2O14827 1237 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 FSCN2O14926 492 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 MAPK4P31152 587 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 SGO2Q562F6 1265 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 ANKRD20A8PQ5CZ79 823 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 ARHGEF16Q5VV41 709 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 MTMR14Q8NCE2 650 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 FAM84AQ96KN4 292 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 PLVAPQ9BX97 442 aa15.33■□□□□ 0.04
USP44-203ENST00000537435 DNM1LO00429 736 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 GTF2H1P32780 548 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 KRT17Q04695 432 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 SNX1Q13596 522 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 USP37Q86T82 979 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 RTKN2Q8IZC4 609 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 CEP170P1Q96L14 293 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 INTS9Q9NV88 658 aaKnown RBP15.32■□□□□ 0.04
USP44-203ENST00000537435 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
USP44-203ENST00000537435 COL4A5P29400 1685 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 PSME4Q14997 1843 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 WNT10BO00744 389 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 MNAT1P51948 309 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
USP44-203ENST00000537435 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 SPIRE2Q8WWL2 714 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 MOV10L1Q9BXT6 1211 aaKnown RBP15.32■□□□□ 0.04
USP44-203ENST00000537435 TRIM7Q9C029 511 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 KIAA1683Q9H0B3 1180 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 GABBR1Q9UBS5 961 aa15.32■□□□□ 0.04
USP44-203ENST00000537435 ADGRA3Q8IWK6 1321 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 HNRNPDLO14979 420 aaKnown RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 UNGP13051 313 aaPredicted RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 SCP2P22307 547 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 TNFAIP8L3Q5GJ75 292 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 PHLDB2Q86SQ0 1253 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 SAMD3Q8N6K7 520 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 SLCO2A1Q92959 643 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 FAM213AQ9BRX8 229 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 NTPCRQ9BSD7 190 aaKnown RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 CCDC113Q9H0I3 377 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 CDC42EP4Q9H3Q1 356 aaKnown RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 CHST7Q9NS84 486 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 PCDHA10Q9Y5I2 948 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 TP73O15350 636 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 ZNF862O60290 1169 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 ATP2C2O75185 946 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 RASSF9O75901 435 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 GCNT1Q02742 428 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 CCDC38Q502W7 563 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 NLRX1Q86UT6 975 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 MCOLN2Q8IZK6 566 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 CCDC197Q8NCU1 140 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 DDX23Q9BUQ8 820 aaKnown RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 STMN4Q9H169 189 aaPredicted RBP15.31■□□□□ 0.04
USP44-203ENST00000537435 SLC40A1Q9NP59 571 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 ASIC3Q9UHC3 531 aa15.31■□□□□ 0.04
USP44-203ENST00000537435 TRMT10CQ7L0Y3 403 aaKnown RBP15.3■□□□□ 0.04
USP44-203ENST00000537435 ENOSF1Q7L5Y1 443 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 CPA5Q8WXQ8 436 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 ATG4AQ8WYN0 398 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 CCT6BQ92526 530 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 BICD1Q96G01 975 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 ZBED3Q96IU2 234 aaPredicted RBP15.3■□□□□ 0.04
USP44-203ENST00000537435 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
USP44-203ENST00000537435 C17orf75Q9HAS0 396 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 WHRNQ9P202 907 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 MROH7Q68CQ1 1323 aa15.3■□□□□ 0.04
USP44-203ENST00000537435 ZBED4O75132 1171 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 ACSL3O95573 720 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 RRM1P23921 792 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 SCTRP47872 440 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 SF3A3Q12874 501 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP44-203ENST00000537435 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms