RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 NOTCH4Q99466 2003 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 K7ENM7 598 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 ALADP13716 330 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 IGFBP6P24592 240 aaPredicted RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 GRM5P41594 1212 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 DSG1Q02413 1049 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 ITIH3Q06033 890 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 SOX4Q06945 474 aaPredicted RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 SEZ6Q53EL9 994 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 RTP2Q5QGT7 225 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 PRSS55Q6UWB4 352 aaPredicted RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 TMEM161BQ8NDZ6 487 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 RAD54LQ92698 747 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 C17orf75Q9HAS0 396 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 PTPRHQ9HD43 1115 aa13.19□□□□□ -0.3
RFC5-208ENST00000537315 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
RFC5-208ENST00000537315 C2CD4DB7Z1M9 353 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 STX6O43752 255 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 GPR37L1O60883 481 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 TADA2AO75478 443 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 FAM13AO94988 1023 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 GLUD1P00367 558 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 ADH1AP07327 375 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 PROZP22891 400 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 STRN3Q13033 797 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
RFC5-208ENST00000537315 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 HERC4Q5GLZ8 1057 aaPredicted RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 TMEM130Q8N3G9 435 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 SNX27Q96L92 541 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 USP28Q96RU2 1077 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 TCHPQ9BT92 498 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 KCND2Q9NZV8 630 aa13.18□□□□□ -0.3
RFC5-208ENST00000537315 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
RFC5-208ENST00000537315 SLC26A4O43511 780 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 RFPL2O75678 378 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 MCF2P10911 925 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 MTHFRP42898 656 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
RFC5-208ENST00000537315 CLCNKBP51801 687 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 SMTNP53814 917 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 YARSP54577 528 aaKnown RBP13.17□□□□□ -0.3
RFC5-208ENST00000537315 FAM171A1Q5VUB5 890 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 PALB2Q86YC2 1186 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 C3orf58Q8NDZ4 430 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
RFC5-208ENST00000537315 BICD1Q96G01 975 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
RFC5-208ENST00000537315 NECTIN4Q96NY8 510 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 HAPLN2Q9GZV7 340 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
RFC5-208ENST00000537315 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 PRR33A8MZF0 331 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 I3L4J1 428 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 TGM5O43548 720 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
RFC5-208ENST00000537315 CXCL8P10145 99 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 PSMD5Q16401 504 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 MYCT1Q8N699 235 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
RFC5-208ENST00000537315 C18orf25Q96B23 403 aaPredicted RBP13.16□□□□□ -0.3
RFC5-208ENST00000537315 TTPALQ9BTX7 342 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 TOPORSQ9NS56 1045 aaPredicted RBP13.16□□□□□ -0.3
RFC5-208ENST00000537315 LARSQ9P2J5 1176 aaKnown RBP13.16□□□□□ -0.3
RFC5-208ENST00000537315 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
RFC5-208ENST00000537315 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
RFC5-208ENST00000537315 ADAM12O43184 909 aa13.15□□□□□ -0.3
RFC5-208ENST00000537315 TOM1L1O75674 476 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms