RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 AMHP03971 560 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 GHRP10912 638 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 XBP1P17861 261 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 CYP3A7P24462 503 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 MPSTP25325 297 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 NEK4P51957 841 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 MRPS6P82932 125 aaKnown RBP7.93□□□□□ -1.14
YBX3-206ENST00000536823 TAP1Q03518 808 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 NONOQ15233 471 aaKnown RBP eCLIP7.93□□□□□ -1.14
YBX3-206ENST00000536823 ME3Q16798 604 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 C8orf34Q49A92 452 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 Q4G0T1 1027 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 FBXO47Q5MNV8 452 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 CEP135Q66GS9 1140 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 MOXD1Q6UVY6 613 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 DNAJC14Q6Y2X3 702 aaPredicted RBP7.93□□□□□ -1.14
YBX3-206ENST00000536823 TMCO2Q7Z6W1 182 aaPredicted RBP7.93□□□□□ -1.14
YBX3-206ENST00000536823 MYOCDQ8IZQ8 938 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 NECAB1Q8N987 351 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 TRAPPC12Q8WVT3 735 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 DNAJB3Q8WWF6 145 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 WASF1Q92558 559 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 APBB2Q92870 758 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 SLC5A5Q92911 643 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 ZBTB10Q96DT7 871 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 MBOAT7Q96N66 472 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 RIT2Q99578 217 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 RAD9AQ99638 391 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 FAM49AQ9H0Q0 323 aaPredicted RBP7.93□□□□□ -1.14
YBX3-206ENST00000536823 ZNF302Q9NR11 478 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 KCNJ14Q9UNX9 436 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 PCDHA2Q9Y5H9 948 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 PCDHA10Q9Y5I2 948 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 CDY2AQ9Y6F7 541 aa7.93□□□□□ -1.14
YBX3-206ENST00000536823 COL4A6Q14031 1691 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 LOXHD1Q8IVV2 1947 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 SPTBN5Q9NRC6 3674 aaKnown RBP7.92□□□□□ -1.14
YBX3-206ENST00000536823 CCDC194A0A1B0GVG4 234 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 SMIM35A0A1B0GVV1 85 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.92□□□□□ -1.14
YBX3-206ENST00000536823 LCHNA4D1U4 455 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 M0QZ92 97 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 GAS2O43903 313 aaKnown RBP7.92□□□□□ -1.14
YBX3-206ENST00000536823 ZNF862O60290 1169 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 DTNBO60941 627 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 PSMD10O75832 226 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 GCFC2P16383 781 aaKnown RBP7.92□□□□□ -1.14
YBX3-206ENST00000536823 JAK3P52333 1124 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 ATP11AP98196 1134 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 LPIN1Q14693 890 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 INF2Q27J81 1249 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 ZNF484Q5JVG2 852 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 LRCH2Q5VUJ6 765 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 SWSAP1Q6NVH7 229 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 MTHFD1LQ6UB35 978 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.92□□□□□ -1.141e-9■■■■■ 31
YBX3-206ENST00000536823 TSHZ1Q6ZSZ6 1077 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.92□□□□□ -1.14
YBX3-206ENST00000536823 CKAP2LQ8IYA6 745 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 USP38Q8NB14 1042 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 NSUN7Q8NE18 718 aaKnown RBP7.92□□□□□ -1.14
YBX3-206ENST00000536823 RDM1Q8NG50 284 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 ETNPPLQ8TBG4 499 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 FAM167AQ96KS9 214 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 TEKT3Q9BXF9 490 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 UNC45AQ9H3U1 944 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 DISC1Q9NRI5 854 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 TRPV2Q9Y5S1 764 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 KDM3AQ9Y4C1 1321 aa7.92□□□□□ -1.14
YBX3-206ENST00000536823 COL4A4P53420 1690 aaPredicted RBP7.92□□□□□ -1.14
YBX3-206ENST00000536823 LINC01553A4QN01 128 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 EPOPA6NHQ4 379 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 CHMP2AO43633 222 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 SLC37A4O43826 429 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 JAK2O60674 1132 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 SMNDC1O75940 238 aaKnown RBP eCLIP7.91□□□□□ -1.14
YBX3-206ENST00000536823 PAPLNO95428 1278 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 C22orf31O95567 290 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 FDPSP14324 419 aaKnown RBP7.91□□□□□ -1.14
YBX3-206ENST00000536823 KLRC1P26715 233 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 MAP4P27816 1152 aaKnown RBP7.91□□□□□ -1.14
YBX3-206ENST00000536823 SFNP31947 248 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 EIF1AXP47813 144 aaKnown RBP7.91□□□□□ -1.14
YBX3-206ENST00000536823 HTRA4P83105 476 aaPredicted RBP7.91□□□□□ -1.14
YBX3-206ENST00000536823 PRKCEQ02156 737 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 ST3GAL1Q11201 340 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 UGCGQ16739 394 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 LETM2Q2VYF4 491 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 B3GNT9Q6UX72 402 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 SPRED2Q7Z698 418 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 NEK8Q86SG6 692 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 ETFBKMTQ8IXQ9 262 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 NME8Q8N427 588 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 FLCNQ8NFG4 579 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 ARNTL2Q8WYA1 636 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 GJA10Q969M2 543 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 TGS1Q96RS0 853 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms