RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KIFC3Q9BVG8 833 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 CXCL16Q9H2A7 254 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 POLD4Q9HCU8 107 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 KIAA1024Q9UPX6 916 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 GDAQ9Y2T3 454 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 STK24Q9Y6E0 443 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 TRIP11Q15643 1979 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 NARSO43776 548 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 NPR3P17342 541 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 AOC1P19801 751 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PDIA5Q14554 519 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 NBR1Q14596 966 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PSMD5Q16401 504 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PDXDC1Q6P996 788 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 APBB1IPQ7Z5R6 666 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 LNX1Q8TBB1 728 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 CLSTN3Q9BQT9 956 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 RAB34Q9BZG1 259 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 WNT16Q9UBV4 365 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 FBXW11Q9UKB1 542 aa21.67■■□□□ 1.06
TNFRSF1B-204ENST00000536782 NT5DC1Q5TFE4 455 aa21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 ATF7IP2Q5U623 682 aa21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 GET4Q7L5D6 327 aaPredicted RBP21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 SLC44A3Q8N4M1 653 aa21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 RTP3Q9BQQ7 232 aa21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 DDX19AQ9NUU7 478 aaKnown RBP21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 ZNF292O60281 2723 aa21.66■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PROB1E7EW31 1015 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 K7ERI5 159 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PI15O43692 258 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 CFHP08603 1231 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 LAMP2P13473 410 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 U2AF2P26368 475 aaKnown RBP eCLIP21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 LIN9Q5TKA1 542 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 IGSF22Q8N9C0 903 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 SNX29Q8TEQ0 813 aa21.65■■□□□ 1.06
TNFRSF1B-204ENST00000536782 HNRNPA1P09651 372 aaKnown RBP eCLIP21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 NBL1P41271 181 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PTGDRQ13258 359 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PPM1LQ5SGD2 360 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 DNM3Q9UQ16 869 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 TNFSF13BQ9Y275 285 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PCDHB6Q9Y5E3 794 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 VWA8A3KMH1 1905 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 DCHS1Q96JQ0 3298 aa21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 EP300Q09472 2414 aaPredicted RBP21.64■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CCDC169A6NNP5 214 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 TMEM189-UBE2V1I3L0A0 370 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 STK25O00506 426 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 SRFP11831 508 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 FSHRP23945 695 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 TOB1P50616 345 aaPredicted RBP21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 GLRA4Q5JXX5 417 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 KRT79Q5XKE5 535 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 DCLRE1AQ6PJP8 1040 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CCDC105Q8IYK2 499 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PPP1R10Q96QC0 940 aaKnown RBP21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 KIF2CQ99661 725 aa21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 ZFP37Q9Y6Q3 630 aaPredicted RBP21.63■■□□□ 1.05
TNFRSF1B-204ENST00000536782 ANHXE9PGG2 379 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 E9PMD0 336 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 LAD1O00515 517 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 B3GAT3O94766 335 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 C8AP07357 584 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 NPTX2P47972 431 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 YARSP54577 528 aaKnown RBP21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PEX3P56589 373 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 GRASPQ7Z6J2 395 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 UROC1Q96N76 676 aa21.62■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PHLPP2Q6ZVD8 1323 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 KRBA1A5PL33 1030 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 ADAM12O43184 909 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 XYLBO75191 536 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 FGFR3P22607 806 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 RFX1P22670 979 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 HOXA9P31269 272 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 OR1D2P34982 312 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CLCNKBP51801 687 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 DMP1Q13316 513 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 HTR4Q13639 388 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 RAB33AQ14088 237 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 ASCL5Q7RTU5 278 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 DTWD2Q8NBA8 298 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 ACO2Q99798 780 aaKnown RBP21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CCDC94Q9BW85 323 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 TMEM134Q9H6X4 195 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 TOPORSQ9NS56 1045 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CA14Q9ULX7 337 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 NUMBLQ9Y6R0 609 aa21.61■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CACNA1IQ9P0X4 2223 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 NOTCH4Q99466 2003 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 SMIM28A0A1B0GU29 152 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 CCL16O15467 120 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 TRAPPC3O43617 180 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 HIP1RO75146 1068 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 PRPHP41219 470 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 GRM5P41594 1212 aa21.6■■□□□ 1.05
TNFRSF1B-204ENST00000536782 UPP1Q16831 310 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms