RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 RPA1P27694 616 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 PSMC2P35998 433 aaKnown RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 STAT3P40763 770 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SSR1P43307 286 aaKnown RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 CRKLP46109 303 aaKnown RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ITGA8P53708 1063 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 CACNA2D1P54289 1103 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 KRT17Q04695 432 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ZNF543Q08ER8 600 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 AP1B1Q10567 949 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 NR1H3Q13133 447 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SETDB1Q15047 1291 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 KYNUQ16719 465 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 GSTA3Q16772 222 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 WDR72Q3MJ13 1102 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ACSBG2Q5FVE4 666 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SNX30Q5VWJ9 437 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 PHLDB3Q6NSJ2 640 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 POTEGQ6S5H5 508 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 DSTYKQ6XUX3 929 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SEPT14Q6ZU15 432 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 OTOAQ7RTW8 1153 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 TXNRD3Q86VQ6 643 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 CATSPER3Q86XQ3 398 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 CCDC125Q86Z20 511 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SLC9A9Q8IVB4 645 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 KBTBD2Q8IY47 623 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ANKRD35Q8N283 1001 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 KCTD17Q8N5Z5 321 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 B4GALNT2Q8NHY0 566 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 LRRC8CQ8TDW0 803 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SPOCK2Q92563 424 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SNF8Q96H20 258 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 NR1H4Q96RI1 486 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 HERPUD2Q9BSE4 406 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 STRA6Q9BX79 667 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 TRIM4Q9C037 500 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ANKRD2Q9GZV1 360 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 SSU72Q9NP77 194 aaKnown RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 DMAP1Q9NPF5 467 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 KRT82Q9NSB4 513 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 TFCP2L1Q9NZI6 479 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 PDP2Q9P2J9 529 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 APEX2Q9UBZ4 518 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 NOCTQ9UK39 431 aaKnown RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 STX8Q9UNK0 236 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 PHF24Q9UPV7 400 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 GREB1LQ9C091 1923 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ATRNL1Q5VV63 1379 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 FRMPD2Q68DX3 1309 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 CLIC2O15247 247 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 PMM2O15305 246 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 GSC2O15499 205 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 TYROBPO43914 113 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 ZBED4O75132 1171 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 KRT36O76013 467 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 PSMG1O95456 288 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 CBX6O95503 412 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 GZMAP12544 262 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 RAP1GDS1P52306 607 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 GSTO1P78417 241 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 SLC34A1Q06495 639 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 GABPAQ06546 454 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 KCNA1Q09470 495 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 PTP4A2Q12974 167 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 CALCOCO2Q13137 446 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 LSAMPQ13449 338 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 ITPK1Q13572 414 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 LAMB3Q13751 1172 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 MYBPC2Q14324 1141 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 SPARCL1Q14515 664 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 MESDQ14696 234 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 SLC1A5Q15758 541 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 SLC4A8Q2Y0W8 1093 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 Q4G0T1 1027 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 EPC2Q52LR7 807 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 C1orf220Q5T0J3 134 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 TCERG1LQ5VWI1 586 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 DPY19L2Q6NUT2 758 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 LRRC74BQ6ZQY2 392 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 C15orf52Q6ZUT6 534 aaKnown RBP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 FAM47EQ6ZV65 393 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 NLRP9Q7RTR0 991 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 ANKS1BQ7Z6G8 1248 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 PRUNE1Q86TP1 453 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 CCDC25Q86WR0 208 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 NBPF5PQ86XG9 351 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 DZIP1Q86YF9 867 aaKnown RBP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 ARHGEF19Q8IW93 802 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 CCDC105Q8IYK2 499 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 RPUSD2Q8IZ73 545 aaKnown RBP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 ARHGAP18Q8N392 663 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPSF7-215ENST00000536145 WDR66Q8TBY9 1149 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 TGFBRAP1Q8WUH2 860 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 TMEM174Q8WUU8 243 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 MAIP1Q8WWC4 291 aa7.38□□□□□ -1.23
CPSF7-215ENST00000536145 LENG9Q96B70 501 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms