RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 FAM171A1Q5VUB5 890 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 TMEM134Q9H6X4 195 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
RTN3-207ENST00000536011 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.42□□□□□ -0.11e-11■□□□□ 9.6
RTN3-207ENST00000536011 C2orf16Q68DN1 1984 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 TMEM189-UBE2V1I3L0A0 370 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 HIP1RO75146 1068 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 RFPL2O75678 378 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 SMTNP53814 917 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 VCPP55072 806 aaKnown RBP14.41□□□□□ -0.1
RTN3-207ENST00000536011 PSMD5Q16401 504 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 RTP2Q5QGT7 225 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 NT5DC1Q5TFE4 455 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 EEF1DP3Q658K8 133 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 LILRA6Q6PI73 481 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.41□□□□□ -0.1
RTN3-207ENST00000536011 CEP57Q86XR8 500 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 GLYCTKQ8IVS8 523 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 HASPINQ8TF76 798 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 RABGGTAQ92696 567 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 PAAF1Q9BRP4 392 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 PRKD2Q9BZL6 878 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 KCNK12Q9HB15 430 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 KCND2Q9NZV8 630 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 EPS15L1Q9UBC2 864 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 FBXL21Q9UKT6 434 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 DUSP12Q9UNI6 340 aa14.41□□□□□ -0.1
RTN3-207ENST00000536011 MYO10Q9HD67 2058 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 PP2D1A8MPX8 630 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 E9PMD0 336 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 XYLBO75191 536 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ZMYND10O75800 440 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 B3GAT3O94766 335 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 EDN1P05305 212 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 HNRNPA1P09651 372 aaKnown RBP eCLIP14.4□□□□□ -0.1
RTN3-207ENST00000536011 SPATA31D3P0C874 917 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 GUCY2CP25092 1073 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 GRM5P41594 1212 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 CLCN5P51795 746 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ATP2C1P98194 919 aaPredicted RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 STRN3Q13033 797 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ZRSR1Q15695 479 aaKnown RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 NAB2Q15742 525 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ARL6IP4Q66PJ3 421 aaKnown RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 ASTLQ6HA08 431 aaPredicted RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 DCLRE1AQ6PJP8 1040 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 PRSS55Q6UWB4 352 aaPredicted RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 SPATA31D4Q6ZUB0 917 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ZNF707Q96C28 371 aaPredicted RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 TMX3Q96JJ7 454 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 PPP1R10Q96QC0 940 aaKnown RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 ACO2Q99798 780 aaKnown RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 TCHPQ9BT92 498 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ARHGAP28Q9P2N2 729 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 CACNG4Q9UBN1 327 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 FBXW11Q9UKB1 542 aa14.4□□□□□ -0.1
RTN3-207ENST00000536011 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 ZFP37Q9Y6Q3 630 aaPredicted RBP14.4□□□□□ -0.1
RTN3-207ENST00000536011 H0YCG3 227 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 SLC26A4O43511 780 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 GALR2O43603 387 aaPredicted RBP14.39□□□□□ -0.11
RTN3-207ENST00000536011 PDGFBP01127 241 aaPredicted RBP14.39□□□□□ -0.11
RTN3-207ENST00000536011 MCF2P10911 925 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 GJB2P29033 226 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 HOXA9P31269 272 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 TCF15Q12870 199 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 PPM1LQ5SGD2 360 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 HYIQ5T013 277 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 MPZL3Q6UWV2 235 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 C1orf186Q6ZWK4 172 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 RTL10Q7L3V2 364 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 LNX1Q8TBB1 728 aaPredicted RBP14.39□□□□□ -0.11
RTN3-207ENST00000536011 SPIRE2Q8WWL2 714 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
RTN3-207ENST00000536011 AK8Q96MA6 479 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 RUSC1Q9BVN2 902 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 CDT1Q9H211 546 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 SMC3Q9UQE7 1217 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 USP20Q9Y2K6 914 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 CACNA1HO95180 2353 aa14.39□□□□□ -0.11
RTN3-207ENST00000536011 MTCL1Q9Y4B5 1905 aaKnown RBP14.39□□□□□ -0.11
RTN3-207ENST00000536011 USP34Q70CQ2 3546 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 VWA3AA6NCI4 1184 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 BMP15O95972 392 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 C8AP07357 584 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 MYBP10242 640 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 SCP2P22307 547 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 FGFR3P22607 806 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 CDC25AP30304 524 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 IL17AQ16552 155 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 UPP1Q16831 310 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 GLRA4Q5JXX5 417 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 ANKS3Q6ZW76 656 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms