RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
PAAF1-207ENST00000536003 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 SLC12A3P55017 1021 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 OSTNP61366 133 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 SOX4Q06945 474 aaPredicted RBP16.87■□□□□ 0.29
PAAF1-207ENST00000536003 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 IER5LQ5T953 404 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
PAAF1-207ENST00000536003 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 CCDC149Q6ZUS6 474 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 BMP8AQ7Z5Y6 402 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 C3orf58Q8NDZ4 430 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 ZNF707Q96C28 371 aaPredicted RBP16.87■□□□□ 0.29
PAAF1-207ENST00000536003 LIMD1Q9UGP4 676 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 SORCS3Q9UPU3 1222 aa16.87■□□□□ 0.29
PAAF1-207ENST00000536003 CCDC195A0A1B0GUA6 201 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 PROZP22891 400 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 CLCNKBP51801 687 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 VCPP55072 806 aaKnown RBP16.86■□□□□ 0.29
PAAF1-207ENST00000536003 FAM171A1Q5VUB5 890 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 ARL6IP4Q66PJ3 421 aaKnown RBP16.86■□□□□ 0.29
PAAF1-207ENST00000536003 CD300LGQ6UXG3 332 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 CMASQ8NFW8 434 aaPredicted RBP16.86■□□□□ 0.29
PAAF1-207ENST00000536003 MFSD14AQ96MC6 490 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 TMEM134Q9H6X4 195 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 USTQ9Y2C2 406 aa16.86■□□□□ 0.29
PAAF1-207ENST00000536003 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.86■□□□□ 0.29
PAAF1-207ENST00000536003 ADAM12O43184 909 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 LILRA6Q6PI73 481 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 CEP57Q86XR8 500 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 ZDHHC14Q8IZN3 488 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 SYT2Q8N9I0 419 aaPredicted RBP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 TMEM161BQ8NDZ6 487 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 ZBTB45Q96K62 511 aaPredicted RBP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 ZMAT2Q96NC0 199 aaKnown RBP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 CLSTN3Q9BQT9 956 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 TTPALQ9BTX7 342 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 MRPL4Q9BYD3 311 aaKnown RBP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 FNIP2Q9P278 1114 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 MYH15Q9Y2K3 1946 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 CACNA1HO95180 2353 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 PLA2G4BP0C869 781 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
PAAF1-207ENST00000536003 GRM5P41594 1212 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 CUL4AQ13619 759 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 PSMD5Q16401 504 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 FBXL6Q8N531 539 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 PRSS33Q8NF86 280 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 PIK3R5Q8WYR1 880 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 SNX27Q96L92 541 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
PAAF1-207ENST00000536003 CLUHO75153 1309 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
PAAF1-207ENST00000536003 I3L4J1 428 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
PAAF1-207ENST00000536003 PLS3P13797 630 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
PAAF1-207ENST00000536003 NHLH1Q02575 133 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 UPP1Q16831 310 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 SEZ6Q53EL9 994 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 GPR65Q8IYL9 337 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 TMEM130Q8N3G9 435 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 SMG7Q92540 1137 aaKnown RBP16.84■□□□□ 0.29
PAAF1-207ENST00000536003 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 C17orf75Q9HAS0 396 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 FBXW11Q9UKB1 542 aa16.84■□□□□ 0.29
PAAF1-207ENST00000536003 NOTCH4Q99466 2003 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 B3GAT3O94766 335 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 PAPLNO95428 1278 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 SF3A1Q15459 793 aaKnown RBP16.83■□□□□ 0.28
PAAF1-207ENST00000536003 XKR4Q5GH76 650 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 MPZL3Q6UWV2 235 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 SUGP1Q8IWZ8 645 aaKnown RBP16.83■□□□□ 0.28
PAAF1-207ENST00000536003 SPIRE2Q8WWL2 714 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 REEP2Q9BRK0 252 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 NTPCRQ9BSD7 190 aaKnown RBP16.83■□□□□ 0.28
PAAF1-207ENST00000536003 TIPINQ9BVW5 301 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 HAPLN2Q9GZV7 340 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 WDR6Q9NNW5 1121 aaKnown RBP16.83■□□□□ 0.28
PAAF1-207ENST00000536003 BLOC1S4Q9NUP1 217 aa16.83■□□□□ 0.28
PAAF1-207ENST00000536003 ANK1P16157 1881 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 TMEM189-UBE2V1I3L0A0 370 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 MCF2P10911 925 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 TKTP29401 623 aaKnown RBP16.82■□□□□ 0.28
PAAF1-207ENST00000536003 BRCC3P46736 316 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 CREMQ03060 361 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 KARSQ15046 597 aaKnown RBP16.82■□□□□ 0.28
PAAF1-207ENST00000536003 RSPO2Q6UXX9 243 aaPredicted RBP16.82■□□□□ 0.28
PAAF1-207ENST00000536003 OTOP3Q7RTS5 596 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 BRAPQ7Z569 592 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
PAAF1-207ENST00000536003 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
PAAF1-207ENST00000536003 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
PAAF1-207ENST00000536003 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms