RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ACTN3Q08043 901 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 CLEC16AQ2KHT3 1053 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 TBC1D10BQ4KMP7 808 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 ICE2Q659A1 982 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 SLC39A4Q6P5W5 647 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 CCDC121Q6ZUS5 278 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 GPD1LQ8N335 351 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 PSPC1Q8WXF1 523 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 CEP170P1Q96L14 293 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 RIPK2O43353 540 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 CTNND1O60716 968 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 PPARDQ03181 441 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 CALCOCO2Q13137 446 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 QPCTQ16769 361 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 NIM1KQ8IY84 436 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 CACNA2D3Q8IZS8 1091 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 ATP6V0A1Q93050 837 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 GPRASP2Q96D09 838 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 DLATP10515 647 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 UNGP13051 313 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 HNRNPH1P31943 449 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 ABCD1P33897 745 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 KCNJ1P48048 391 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 FBXW10Q5XX13 1052 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 NSMFQ6X4W1 530 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 TRMT10CQ7L0Y3 403 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 ZNF677Q86XU0 584 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 MAIP1Q8WWC4 291 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 BSNDQ8WZ55 320 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 ROPN1BQ9BZX4 212 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 ROPN1Q9HAT0 212 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 TOPORSQ9NS56 1045 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 WHRNQ9P202 907 aa17.16■□□□□ 0.34
CHMP1A-202ENST00000535997 DGAT1O75907 488 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 CHN1P15882 459 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 SCP2P22307 547 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 COL4A5P29400 1685 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 MAPK4P31152 587 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 SLC1A1P43005 524 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 CXCL9Q07325 125 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 TNFAIP8L3Q5GJ75 292 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 CPNE8Q86YQ8 564 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 P3H4Q92791 437 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 ADAM7Q9H2U9 754 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 ACTR5Q9H9F9 607 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 AVENQ9NQS1 362 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 GABBR1Q9UBS5 961 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 KCNG1Q9UIX4 513 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 PCDHB2Q9Y5E7 798 aa17.15■□□□□ 0.34
CHMP1A-202ENST00000535997 VWA5AO00534 786 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 HNRNPDLO14979 420 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 NR3C2P08235 984 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 MYBL1P10243 752 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 KRT5P13647 590 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 ITIH2P19823 946 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 DRD4P21917 467 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 CCND2P30279 289 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 BPIFB4P59827 614 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 TNFAIP1Q13829 316 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 PPP1R7Q15435 360 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 DHX38Q92620 1227 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 TEPSINQ96N21 525 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 KIAA1586Q9HCI6 787 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 H0YCG3 227 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 RASGRF2O14827 1237 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 CLDN3O15551 220 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 ZNF862O60290 1169 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 STBD1O95210 358 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 MAN1A1P33908 653 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 CLDN10P78369 228 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 IFI35P80217 286 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 ZNF568Q3ZCX4 644 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 SGO2Q562F6 1265 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 C15orf39Q6ZRI6 1047 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 SYDE1Q6ZW31 735 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 MCOLN2Q8IZK6 566 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 TRIM11Q96F44 468 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 ZNF317Q96PQ6 595 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 AZI2Q9H6S1 392 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 ANAPC7Q9UJX3 599 aa17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHMP1A-202ENST00000535997 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 FGFR4P22455 802 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 DGKZQ13574 1117 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 MFSD5Q6N075 450 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 RPAP3Q9H6T3 665 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 PSAPP07602 524 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 MTMR2Q13614 643 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 TAOK1Q7L7X3 1001 aa17.13■□□□□ 0.33
CHMP1A-202ENST00000535997 CCDC13Q8IYE1 715 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms