RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 HOXB8P17481 243 aaPredicted RBP9.72□□□□□ -0.85
CHD4-204ENST00000535810 LONP1P36776 959 aaKnown RBP9.72□□□□□ -0.85
CHD4-204ENST00000535810 UBA7P41226 1012 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 GIT2Q14161 759 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 KARSQ15046 597 aaKnown RBP9.72□□□□□ -0.85
CHD4-204ENST00000535810 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 CASP10Q92851 521 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 SNX21Q969T3 373 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 MFSD14AQ96MC6 490 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 NTPCRQ9BSD7 190 aaKnown RBP9.72□□□□□ -0.85
CHD4-204ENST00000535810 HERC2P3Q9BVR0 1158 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 MRPL4Q9BYD3 311 aaKnown RBP9.72□□□□□ -0.85
CHD4-204ENST00000535810 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 S1PR5Q9H228 398 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 CXCL16Q9H2A7 254 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 TMEM134Q9H6X4 195 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 PTPRHQ9HD43 1115 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 KMT5AQ9NQR1 393 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 BLOC1S4Q9NUP1 217 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 CACNG4Q9UBN1 327 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 TNFSF13BQ9Y275 285 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 CLIC4Q9Y696 253 aa9.72□□□□□ -0.85
CHD4-204ENST00000535810 NPHP3-ACAD11A0A0J9YXS1 232 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 ABLIM1O14639 778 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 SLC16A4O15374 487 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 LILRB3O75022 631 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 URODP06132 367 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 CNPP09543 421 aaKnown RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 EPCAMP16422 314 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 PLCG1P19174 1290 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 MARCKSP29966 332 aaPredicted RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 TUSC3Q13454 348 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 CBX2Q14781 532 aaPredicted RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 NAB2Q15742 525 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 ZNF568Q3ZCX4 644 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 ARSHQ5FYA8 562 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 TAS1R1Q7RTX1 841 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 GPBP1Q86WP2 473 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 TMEM161BQ8NDZ6 487 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 SLC22A17Q8WUG5 538 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 RABGGTAQ92696 567 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 CALML4Q96GE6 196 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 ACO2Q99798 780 aaKnown RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 REEP2Q9BRK0 252 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 PAAF1Q9BRP4 392 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 TARS2Q9BW92 718 aaKnown RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 COLEC11Q9BWP8 271 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 APOL5Q9BWW9 433 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 CDT1Q9H211 546 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 MRPL17Q9NRX2 175 aaKnown RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 CDH22Q9UJ99 828 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 FBXO2Q9UK22 296 aaPredicted RBP9.71□□□□□ -0.86
CHD4-204ENST00000535810 GDAQ9Y2T3 454 aa9.71□□□□□ -0.86
CHD4-204ENST00000535810 ZFHX2Q9C0A1 2572 aaPredicted RBP9.7□□□□□ -0.86
CHD4-204ENST00000535810 MYO15AQ9UKN7 3530 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 CASTOR2A6NHX0 329 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 C2CD2LO14523 706 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 STX6O43752 255 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 KIF4AO95239 1232 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 BRD1O95696 1058 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 MAPTP10636 758 aaKnown RBP9.7□□□□□ -0.86
CHD4-204ENST00000535810 PROZP22891 400 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 GLUD2P49448 558 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 DSG1Q02413 1049 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 HSP90AA2PQ14568 343 aaPredicted RBP9.7□□□□□ -0.86
CHD4-204ENST00000535810 GLRA4Q5JXX5 417 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 SPECC1Q5M775 1068 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 KIAA0319Q5VV43 1072 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 FUT10Q6P4F1 479 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 USP49Q70CQ1 688 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 APBB1IPQ7Z5R6 666 aaPredicted RBP9.7□□□□□ -0.86
CHD4-204ENST00000535810 PPFIBP1Q86W92 1011 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 CEP120Q8N960 986 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 RASSF8Q8NHQ8 419 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 RAD54LQ92698 747 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 EPSTI1Q96J88 318 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 B3GALT6Q96L58 329 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 KLHL5Q96PQ7 755 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 PHF7Q9BWX1 381 aaPredicted RBP9.7□□□□□ -0.86
CHD4-204ENST00000535810 EMILIN2Q9BXX0 1053 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 GPR62Q9BZJ7 368 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 CCSER1Q9C0I3 900 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 ADAM7Q9H2U9 754 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 CHST7Q9NS84 486 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 DZANK1Q9NVP4 752 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 KCNG1Q9UIX4 513 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 ADAM28Q9UKQ2 775 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 ODF2LQ9ULJ1 636 aa9.7□□□□□ -0.86
CHD4-204ENST00000535810 LOC730098B7Z3J9 87 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 TEX28O15482 410 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 SF3B1O75533 1304 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD4-204ENST00000535810 TOM1L1O75674 476 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 THP07101 528 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 MCF2P10911 925 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 KLRC2P26717 231 aa9.69□□□□□ -0.86
CHD4-204ENST00000535810 GRM5P41594 1212 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms