RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 SMG7Q92540 1137 aaKnown RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 CDK5RAP3Q96JB5 506 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 ACO2Q99798 780 aaKnown RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 CCDC94Q9BW85 323 aaPredicted RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 CXCL16Q9H2A7 254 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 PIDD1Q9HB75 910 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 WDR6Q9NNW5 1121 aaKnown RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 TOPORSQ9NS56 1045 aaPredicted RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 ARHGAP28Q9P2N2 729 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 KCNG1Q9UIX4 513 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 RFPL2O75678 378 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 NAB2Q15742 525 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 ZNF568Q3ZCX4 644 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 GLRA4Q5JXX5 417 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 HYIQ5T013 277 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 PDXDC1Q6P996 788 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 PRSS55Q6UWB4 352 aaPredicted RBP17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 TCHPQ9BT92 498 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 ZDHHC7Q9NXF8 308 aa17.77■□□□□ 0.44
CLSTN3-204ENST00000535313 CLUHO75153 1309 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PLXNA3P51805 1871 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 B3GAT3O94766 335 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 GRM5P41594 1212 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PTPN5P54829 565 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 MAPK7Q13164 816 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PSMD5Q16401 504 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 IER5LQ5T953 404 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 LILRA6Q6PI73 481 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PIK3R5Q8WYR1 880 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 UROC1Q96N76 676 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 TBC1D32Q96NH3 1257 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PNMA5Q96PV4 448 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PPP1R10Q96QC0 940 aaKnown RBP17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 PLIN2Q99541 437 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 TARS2Q9BW92 718 aaKnown RBP17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 CDT1Q9H211 546 aa17.76■□□□□ 0.43
CLSTN3-204ENST00000535313 DENND4AQ7Z401 1863 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SFI1A8K8P3 1242 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 TMEM189-UBE2V1I3L0A0 370 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SLC16A4O15374 487 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 MCF2P10911 925 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 AVPR2P30518 371 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 GBP2P32456 591 aaPredicted RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SMTNP53814 917 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 OSTNP61366 133 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 RAD51AP2Q09MP3 1159 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 STRN3Q13033 797 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 TDGQ13569 410 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 DCLRE1AQ6PJP8 1040 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SYT2Q8N9I0 419 aaPredicted RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 LNX1Q8TBB1 728 aaPredicted RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SPIRE2Q8WWL2 714 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 ZNF707Q96C28 371 aaPredicted RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 NTPCRQ9BSD7 190 aaKnown RBP17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 PRKD2Q9BZL6 878 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SMOC2Q9H3U7 446 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 PTPRHQ9HD43 1115 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SLC38A7Q9NVC3 462 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 KCND2Q9NZV8 630 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 C2orf16Q68DN1 1984 aa17.75■□□□□ 0.43
CLSTN3-204ENST00000535313 SMIM28A0A1B0GU29 152 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 TRAPPC3O43617 180 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 ZMYND10O75800 440 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 PAPLNO95428 1278 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 PDGFBP01127 241 aaPredicted RBP17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 PLA2G4BP0C869 781 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 PLS3P13797 630 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 CLCNKBP51801 687 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 MPZL3Q6UWV2 235 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 TAS1R3Q7RTX0 852 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 ALYREFQ86V81 257 aaKnown RBP17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 CEP120Q8N960 986 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 PRSS33Q8NF86 280 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 AK8Q96MA6 479 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 ACAP3Q96P50 834 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 CLSTN3Q9BQT9 956 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 KCNK12Q9HB15 430 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 IGSF9Q9P2J2 1179 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 FBXW11Q9UKB1 542 aa17.74■□□□□ 0.43
CLSTN3-204ENST00000535313 SLC26A4O43511 780 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 BMP15O95972 392 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 HARSP12081 509 aaKnown RBP17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 UBA7P41226 1012 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 SLC12A3P55017 1021 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 UPP1Q16831 310 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 TMEM119Q4V9L6 283 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 ALKAL1Q6UXT8 129 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 TMEM161BQ8NDZ6 487 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 CALML4Q96GE6 196 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 MFSD1Q9H3U5 465 aa17.73■□□□□ 0.43
CLSTN3-204ENST00000535313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.439e-12■■□□□ 13
CLSTN3-204ENST00000535313 MTCL1Q9Y4B5 1905 aaKnown RBP17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 H0YCG3 227 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 N4BP1O75113 896 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms