RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 COASYQ13057 564 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 PPP2R5AQ15172 486 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SMAD2Q15796 467 aaKnown RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 ZBTB6Q15916 424 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 CSPP1Q1MSJ5 1256 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 RTP2Q5QGT7 225 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 ANKRD54Q6NXT1 300 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 PRSS55Q6UWB4 352 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 CRELD2Q6UXH1 353 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 HAUS6Q7Z4H7 955 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SFR1Q86XK3 245 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 HSCBQ8IWL3 235 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 GRAMD1CQ8IYS0 662 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 PDILTQ8N807 584 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 CNNM3Q8NE01 707 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 URGCPQ8TCY9 931 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 MICAL1Q8TDZ2 1067 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 DDX12PQ92771 950 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 CALML4Q96GE6 196 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 TMEM169Q96HH4 297 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 SNX27Q96L92 541 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 DRC1Q96MC2 740 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 KLHL5Q96PQ7 755 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 TMEM175Q9BSA9 504 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 HERC2P3Q9BVR0 1158 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 ZSCAN16Q9H4T2 348 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 ENTPD7Q9NQZ7 604 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 RNF216Q9NWF9 866 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 TBC1D7Q9P0N9 293 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 CD207Q9UJ71 328 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 RCOR1Q9UKL0 485 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 PCDHA7Q9UN72 937 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 USP15Q9Y4E8 981 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 IRAK3Q9Y616 596 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 STK24Q9Y6E0 443 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 CACNA1AO00555 2505 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 MUC6Q6W4X9 2439 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 MIA3Q5JRA6 1907 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 TICRRQ7Z2Z1 1910 aa5.56□□□□□ -1.52
USH1C-210ENST00000534556 NUP210Q8TEM1 1887 aaPredicted RBP5.56□□□□□ -1.52
USH1C-210ENST00000534556 ATG2BQ96BY7 2078 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 MYOFQ9NZM1 2061 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 ZMYM2Q9UBW7 1377 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 HELZP42694 1942 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 TTC26A0AVF1 554 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 LACTBL1A8MY62 500 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 TEX28O15482 410 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 TRAK2O60296 914 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 PPP6R2O75170 966 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 YEATS4O95619 227 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 BMP15O95972 392 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 PIGRP01833 764 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 SOD2P04179 222 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 THP07101 528 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 ADRB2P07550 413 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 SPATA31D3P0C874 917 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 CXCL8P10145 99 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 HARSP12081 509 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 KCNE1P15382 129 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 BRCC3P46736 316 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 NDUFV1P49821 464 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 CLCN4P51793 760 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 GTF2BQ00403 316 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 DSG1Q02413 1049 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 KRT17Q04695 432 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 MCL1Q07820 350 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 GRIK3Q13003 919 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 DMP1Q13316 513 aaPredicted RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 TUSC3Q13454 348 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 SMAD4Q13485 552 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 HSP90AA2PQ14568 343 aaPredicted RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 SMC1AQ14683 1233 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 STK38Q15208 465 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 ENOX2Q16206 610 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 UPP1Q16831 310 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 DCAF4L1Q3SXM0 396 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 ZNF568Q3ZCX4 644 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 PDE12Q6L8Q7 609 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 FUT10Q6P4F1 479 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 LILRA6Q6PI73 481 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 MPZL3Q6UWV2 235 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 SPATA31D4Q6ZUB0 917 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 ZNF720Q7Z2F6 126 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 GLYCTKQ8IVS8 523 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 KCTD17Q8N5Z5 321 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 MYCT1Q8N699 235 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 KRI1Q8N9T8 703 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 LNX1Q8TBB1 728 aaPredicted RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 CDK5RAP3Q96JB5 506 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 RPS6KC1Q96S38 1066 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 TIPINQ9BVW5 301 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 MRPL4Q9BYD3 311 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 TRIM6Q9C030 488 aaPredicted RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 SMOC2Q9H3U7 446 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 POMKQ9H5K3 350 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 C17orf75Q9HAS0 396 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 RXFP1Q9HBX9 757 aa5.55□□□□□ -1.52
USH1C-210ENST00000534556 NGRNQ9NPE2 291 aaKnown RBP5.55□□□□□ -1.52
USH1C-210ENST00000534556 KBTBD4Q9NVX7 518 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms