RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HSP90AA2PQ14568 343 aaPredicted RBP15.44■□□□□ 0.06
SF3B2-215ENST00000534307 XKR4Q5GH76 650 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 KANK3Q6NY19 840 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 ALKAL1Q6UXT8 129 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 SUGP1Q8IWZ8 645 aaKnown RBP15.44■□□□□ 0.06
SF3B2-215ENST00000534307 FBXL6Q8N531 539 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 C12orf76Q8N812 135 aaPredicted RBP15.44■□□□□ 0.06
SF3B2-215ENST00000534307 CEP120Q8N960 986 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 CDK5RAP3Q96JB5 506 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 NECTIN4Q96NY8 510 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 PPP1R10Q96QC0 940 aaKnown RBP15.44■□□□□ 0.06
SF3B2-215ENST00000534307 TARS2Q9BW92 718 aaKnown RBP15.44■□□□□ 0.06
SF3B2-215ENST00000534307 MRPL4Q9BYD3 311 aaKnown RBP15.44■□□□□ 0.06
SF3B2-215ENST00000534307 POMKQ9H5K3 350 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 SSX2IPQ9Y2D8 614 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 GDAQ9Y2T3 454 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 CLIC4Q9Y696 253 aa15.44■□□□□ 0.06
SF3B2-215ENST00000534307 NPHP3-ACAD11A0A0J9YXS1 232 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 CASTOR2A6NHX0 329 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 K7ELQ4 463 aaPredicted RBP15.43■□□□□ 0.06
SF3B2-215ENST00000534307 PAPLNO95428 1278 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 MAPTP10636 758 aaKnown RBP15.43■□□□□ 0.06
SF3B2-215ENST00000534307 PLCG1P19174 1290 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 KLRC2P26717 231 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 UBA7P41226 1012 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 ZXDAP98168 799 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 FOXK2Q01167 660 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 RARS2Q5T160 578 aaKnown RBP15.43■□□□□ 0.06
SF3B2-215ENST00000534307 KIAA1841Q6NSI8 718 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 CES5AQ6NT32 575 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 TMEM87AQ8NBN3 555 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 B3GALT6Q96L58 329 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 MTMR6Q9Y217 621 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 C2orf16Q68DN1 1984 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 CACNA1BQ00975 2339 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 VWA8A3KMH1 1905 aa15.43■□□□□ 0.06
SF3B2-215ENST00000534307 SF3B1O75533 1304 aaKnown RBP eCLIP15.43■□□□□ 0.06
SF3B2-215ENST00000534307 TMEM189-UBE2V1I3L0A0 370 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 MEFVO15553 781 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-215ENST00000534307 C1RP00736 705 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 ADH1AP07327 375 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 WEE2P0C1S8 567 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 MCF2P10911 925 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 MTHFRP42898 656 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 ZNF131P52739 623 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-215ENST00000534307 KARSQ15046 597 aaKnown RBP15.42■□□□□ 0.06
SF3B2-215ENST00000534307 USP41Q3LFD5 358 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 ZNF568Q3ZCX4 644 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 FAM173BQ6P4H8 233 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 MPZL3Q6UWV2 235 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 USP49Q70CQ1 688 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 APBB1IPQ7Z5R6 666 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-215ENST00000534307 CALML4Q96GE6 196 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 RIPOR3Q96MK2 946 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 REEP2Q9BRK0 252 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 SFXN1Q9H9B4 322 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 FNIP2Q9P278 1114 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 KCNG1Q9UIX4 513 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 FBXO2Q9UK22 296 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-215ENST00000534307 ODF2LQ9ULJ1 636 aa15.42■□□□□ 0.06
SF3B2-215ENST00000534307 MORC2Q9Y6X9 1032 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-215ENST00000534307 SMIM28A0A1B0GU29 152 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 TADA2AO75478 443 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 TOM1L1O75674 476 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 NCKAP1LP55160 1127 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 GLRA4Q5JXX5 417 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 RTP2Q5QGT7 225 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 LILRA6Q6PI73 481 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 CD300LGQ6UXG3 332 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 TMC5Q6UXY8 1006 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 ZPBP2Q6X784 338 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 GPR149Q86SP6 731 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 GPBP1Q86WP2 473 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 HASPINQ8TF76 798 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 RAD54LQ92698 747 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 SNX21Q969T3 373 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 ASIC4Q96FT7 647 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.41■□□□□ 0.06
SF3B2-215ENST00000534307 LARSQ9P2J5 1176 aaKnown RBP15.41■□□□□ 0.06
SF3B2-215ENST00000534307 SRPRBQ9Y5M8 271 aaKnown RBP15.41■□□□□ 0.06
SF3B2-215ENST00000534307 CITO14578 2027 aa15.41■□□□□ 0.06
SF3B2-215ENST00000534307 MTCL1Q9Y4B5 1905 aaKnown RBP15.41■□□□□ 0.06
SF3B2-215ENST00000534307 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 IGFBP6P24592 240 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 SMTNP53814 917 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 SOX4Q06945 474 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 MCM6Q14566 821 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 UPP1Q16831 310 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 C15orf39Q6ZRI6 1047 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 ZBTB33Q86T24 672 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 CMASQ8NFW8 434 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 RIN2Q8WYP3 895 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 ZBTB45Q96K62 511 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 ZMAT2Q96NC0 199 aaKnown RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 FIZ1Q96SL8 496 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 CCDC94Q9BW85 323 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms