RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	ZCRB1	Q8TBF4	217 aa	Known RBP	4.61	□□□□□ -1.67
RDX-215	ENST00000533961	TSPEAR	Q8WU66	669 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	ZNF480	Q8WV37	535 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	SSH1	Q8WYL5	1049 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	FATE1	Q969F0	183 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	RAB24	Q969Q5	203 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	DNAJC28	Q9NX36	388 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA8	Q9Y5G5	932 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA7	Q9Y5G6	932 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA6	Q9Y5G7	932 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA3	Q9Y5H0	932 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA2	Q9Y5H1	932 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	COL4A3	Q01955	1670 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	GRXCR1	A8MXD5	290 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	BLOC1S1	P78537	153 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	KLF1	Q13351	362 aa	Predicted RBP	4.6	□□□□□ -1.67
RDX-215	ENST00000533961	PTPN21	Q16825	1174 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	SYDE2	Q5VT97	1194 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	BTNL9	Q6UXG8	535 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	GPRIN1	Q7Z2K8	1008 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	MB21D1	Q8N884	522 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	AUTS2	Q8WXX7	1259 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	FAM193B	Q96PV7	902 aa	Predicted RBP	4.6	□□□□□ -1.67
RDX-215	ENST00000533961	NDC1	Q9BTX1	674 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	FAM30A	Q9NZY2	134 aa		4.6	□□□□□ -1.67
RDX-215	ENST00000533961	G3BP2	Q9UN86	482 aa	Known RBP	4.6	□□□□□ -1.67
RDX-215	ENST00000533961		K7ESF4	209 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	FZD9	O00144	591 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	WNT10B	O00744	389 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	XPOT	O43592	962 aa	Known RBP	4.59	□□□□□ -1.67
RDX-215	ENST00000533961	PRAMEF4	O60810	478 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	CFB	P00751	764 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	HLA-DOA	P06340	250 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	SPATA31D3	P0C874	917 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	RBP3	P10745	1247 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	CTSS	P25774	331 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	CASR	P41180	1078 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	FLT3LG	P49771	235 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	SLC5A3	P53794	718 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	KRTAP5-11	Q6L8G4	156 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	LRRC55	Q6ZSA7	311 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	SPATA31D4	Q6ZUB0	917 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	PLXDC1	Q8IUK5	500 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	MSL3	Q8N5Y2	521 aa	Known RBP	4.59	□□□□□ -1.67
RDX-215	ENST00000533961	ZFP28	Q8NHY6	868 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	NELL1	Q92832	810 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	MYEOV	Q96EZ4	313 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	KCNH6	Q9H252	994 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	BCO1	Q9HAY6	547 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	CYP4F11	Q9HBI6	524 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	GPRC5D	Q9NZD1	345 aa		4.59	□□□□□ -1.67
RDX-215	ENST00000533961	THRAP3	Q9Y2W1	955 aa	Known RBP	4.59	□□□□□ -1.67
RDX-215	ENST00000533961	TBKBP1	A7MCY6	615 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	RNASET2	O00584	256 aa	Known RBP	4.58	□□□□□ -1.68
RDX-215	ENST00000533961	TEX33	O43247	280 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	ADCY6	O43306	1168 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	TMEM127	O75204	238 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	ITGA10	O75578	1167 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	PDGFRB	P09619	1106 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	LAG3	P18627	525 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	BMPR1A	P36894	532 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	CLK3	P49761	638 aa	Known RBP	4.58	□□□□□ -1.68
RDX-215	ENST00000533961	MXRA7	P84157	204 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	LRRC41	Q15345	812 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	MST1L	Q2TV78	715 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	INAVA	Q3KP66	663 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	FAM47A	Q5JRC9	791 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	NECAB2	Q7Z6G3	386 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.58	□□□□□ -1.68
RDX-215	ENST00000533961	GPR156	Q8NFN8	814 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	JADE3	Q92613	823 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	DPF2	Q92785	391 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
RDX-215	ENST00000533961	GREM2	Q9H772	168 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	EIF2B4	Q9UI10	523 aa	Known RBP	4.58	□□□□□ -1.68
RDX-215	ENST00000533961	ZBTB21	Q9ULJ3	1066 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	HS3ST4	Q9Y661	456 aa		4.58	□□□□□ -1.68
RDX-215	ENST00000533961	SPATA31A6	Q5VVP1	1343 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	WASHC2A	Q641Q2	1341 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	SNRPA1	P09661	255 aa	Known RBP	4.57	□□□□□ -1.68
RDX-215	ENST00000533961	NCL	P19338	710 aa	Known RBP	4.57	□□□□□ -1.68
RDX-215	ENST00000533961	C5AR1	P21730	350 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	FXR1	P51114	621 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
RDX-215	ENST00000533961	SP140	Q13342	867 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	BMT2	Q1RMZ1	405 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	FAM214A	Q32MH5	1076 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	PLEKHG6	Q3KR16	790 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	MUM1L1	Q5H9M0	696 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	EFCAB12	Q6NXP0	572 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	ABHD15	Q6UXT9	468 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	KCNK18	Q7Z418	384 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	OR7D4	Q8NG98	312 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	CYFIP2	Q96F07	1278 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	FAXDC2	Q96IV6	333 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	LSM14B	Q9BX40	385 aa	Known RBP	4.57	□□□□□ -1.68
RDX-215	ENST00000533961	BRIP1	Q9BX63	1249 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	PUS7L	Q9H0K6	701 aa	Known RBP	4.57	□□□□□ -1.68
RDX-215	ENST00000533961	LDAH	Q9H6V9	325 aa		4.57	□□□□□ -1.68
RDX-215	ENST00000533961	MOCS1	Q9NZB8	636 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms